Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq4610 255 2e-65 seq303 251 2e-64 seq131744 237 5e-60 seq14957 224 3e-56 seq38801 129 2e-27 seq145483 123 7e-26 seq83951 123 7e-26 seq32575 118 3e-24 >seq4610 Length=4342 Score = 255 bits (282), Expect = 2e-65 Identities = 267/353 (76%), Gaps = 21/353 (6%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||||| ||||| ||||||||| |||||||||||||| ||| | ||||||||| Sbjct 450 ATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCGACGATGGTTAGGGGCCCTGAGAGG 509 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 | |||| ||||| ||| |||||||||||| ||| |||||||||||||||||||||| || Sbjct 510 GGGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGCAGTGAGG 569 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGG-CCTT 346 ||||||| ||||||||| | ||||||| |||| | |||||||| | || || || ||| Sbjct 570 AATATTGGACAATGGGCGGAGGCCTGATCCAGCCATGCCGCGTGCGGGAAGACGGCCCTA 629 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATA-------------------ATGACGGTA 387 ||||||||||| | || | | |||||| | |||||||| Sbjct 630 CGGGTCGTAAACCGCTTTTGTACGGGAAGAAACCTATCTACGTGTAGATAGCTGACGGTA 689 Query 388 CTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTA 447 | | || ||| |||||||||| |||||||||||||||||||||||| |||| | | Sbjct 690 CCGTAAGAATAAGGACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTCCGA 749 Query 448 GCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||||||||||| | | ||| |||||||| |||||| || ||||||| Sbjct 750 GCGTTATCCGGAATCA-TTGGGTTTAAAGGGTCCGTAGGCGGGCCGTTAAGTC 801 >seq303 Length=42796 Score = 251 bits (278), Expect = 2e-64 Identities = 269/351 (77%), Gaps = 16/351 (5%) Strand=Plus/Minus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 ||||||||| |||| ||| |||||| |||||||| || ||| ||| ||||| || |||| Sbjct 41296 TCTGATTAGTTAGTAGGTGAGGTAAAGGCTTACCTAGACGATAATCGGTAGCGGATCTGA 41237 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| ||| | |||||||||| |||||||||||| ||||||| |||||| |||||||||| Sbjct 41236 GAGGATGACCCGCCACATTGGGACTGAGACACGGCCCAAACTTCTACGGAAGGCAGCAGT 41177 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 | |||||||| |||||||| ||||||||| | |||| | |||| ||||||||| Sbjct 41176 GAGGAATATTCTGCAATGGGCGAAAGCCTGACAGTGTGACGCTGAGTGAAGGATGAAGGC 41117 Query 344 C----------TTC--GGGTCGTAAAGCTC-TGTCCTCAAGGAAG-ATAATGACGGTACT 389 | ||| |||||||||| || | |||| |||| |||||||| || Sbjct 41116 CACAACCCGAGTTCGGGGGTCGTAAACTTCTTTTCCTAGGCGAAGAATAATGAC-TAACC 41058 Query 390 TGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGC 449 | || ||| ||||||||| |||||||||||||||||||| ||| || || ||| Sbjct 41057 TAGCAAGAAAGTATCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGATGCGAGC 40998 Query 450 GTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||||||||| ||| |||||||||| || ||||||| | | |||||| Sbjct 40997 GTTATCCGGAATGACT-GGGCGTAAAGCGTTTGTAGGTGATCTTCTAAGTC 40948 >seq131744 Length=222 Score = 237 bits (262), Expect = 5e-60 Identities = 188/223 (84%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 231 ATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAAT 290 ||| |||||| ||| |||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 222 ATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAAT 163 Query 291 ATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGG 350 |||| |||||||| || |||||| |||| | |||||||| | || ||||||||| ||| Sbjct 162 ATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGCGTGAAGAAGGCCTTAGGG 103 Query 351 TCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTA-CTTGAGGAGGAAGCCCCGGCTA 409 | ||||||| || || |||||| ||||||||| | ||| || |||||||||||| Sbjct 102 TTGTAAAGCGCTTTCACTGGTGAAGATGATGACGGTAGCCAGAGAAG-AAGCCCCGGCTA 44 Query 410 ACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTT 452 ||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 43 ACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTT 1 >seq14957 Length=222 Score = 224 bits (248), Expect = 3e-56 Identities = 183/222 (82%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 231 ATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAAT 290 ||| |||||| ||| |||||||||||| ||| |||||||||||||||||||||||||||| Sbjct 222 ATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAAT 163 Query 291 ATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGG 350 ||| |||||||| || |||||| |||| | |||||||| | || ||||||||| ||| Sbjct 162 CTTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGGGTGAAGAAGGCCTTAGGG 103 Query 351 TCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAA 410 | ||||||| || || || ||| ||||||||| || |||||||||||||| Sbjct 102 TTGTAAAGCCCTTTCAGTCGTGACGATGATGACGGTAGCGACAGAAGAAGCCCCGGCTAA 43 Query 411 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTT 452 || |||||||||||||||||||||||| ||||||| |||||| Sbjct 42 CTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTT 1 >seq38801 Length=4489 Score = 129 bits (142), Expect = 2e-27 Identities = 188/262 (72%), Gaps = 18/262 (7%) Strand=Plus/Minus Query 10 CTCTTCGGAGAAGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACAC 69 |||||||||| ||| |||| |||||||||||||||||||| ||||||||||| Sbjct 244 CTCTTCGGAGT-GAGTGGCGCACGGGTGAGTAACGCGTGGG-AACCTGCCCTGGGGTTGG 187 Query 70 GGATAACATACCGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAG 129 | ||||| |||| | |||||||| |||| ||| || | ||| Sbjct 186 GAATAACCGCTGGAAACGGCGGCTAATACCCGATACGC--CTTG---CGAGGGAAAGATT 132 Query 130 TATCAAAGCTCCGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAAC 189 |||| || | || ||| | |||||||| |||||||| |||||| ||||| Sbjct 131 TATC---GCCCTGG--------GATGGGCCCGCGTCCGATTAGCTTGTTGGTGGGGTAAT 83 Query 190 GGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTG 249 ||| |||||||| ||||| ||||| | |||||||| ||||| |||||| ||| |||| Sbjct 82 GGCCCACCAAGGCTTCGATCGGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTG 23 Query 250 AGACACGGTCCAAACTCCTACG 271 |||||||| ||| ||||||||| Sbjct 22 AGACACGGCCCAGACTCCTACG 1 >seq145483 Length=309 Score = 123 bits (136), Expect = 7e-26 Identities = 82/90 (91%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 400 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 459 ||||||||||||| |||||||||||||||||||||||| ||||||| |||||| | |||| Sbjct 309 GCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTGTTCGGA 250 Query 460 ATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 |||||| |||||||||||| ||||||| || Sbjct 249 ATTACT-GGGCGTAAAGGGCGCGTAGGCGG 221 >seq83951 Length=556 Score = 123 bits (136), Expect = 7e-26 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 151 GGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCA 210 |||| |||||||| |||||| |||||||| ||||| ||| ||||||| |||||||| Sbjct 121 GGATGAACCCGCGTTAGATTAGGTAGTTGGTGGGGTAATGGCCTACCAAGCCGACGATCT 62 Query 211 GTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTAC 270 |||| | |||||||| ||||| |||||| ||| |||||||||||| ||| |||||||| Sbjct 61 ATAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTAC 2 Query 271 G 271 | Sbjct 1 G 1 >seq32575 Length=309 Score = 118 bits (130), Expect = 3e-24 Identities = 81/90 (90%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 400 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 459 ||||||||||||| |||||||||||||||||||||||| ||||||| |||||| | |||| Sbjct 309 GCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTGTTCGGA 250 Query 460 ATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 ||||| |||||||||||| ||||||| || Sbjct 249 TTTACT-GGGCGTAAAGGGCGCGTAGGCGG 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1495403170560