Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq32575 340 4e-91 seq145483 336 5e-90 seq4610 289 7e-76 seq303 154 4e-35 seq105608 150 4e-34 seq4648 141 2e-31 seq130150 127 5e-27 seq131744 89.7 1e-15 seq14957 89.7 1e-15 >seq32575 Length=309 Score = 340 bits (376), Expect = 4e-91 Identities = 263/310 (85%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 15 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 74 ||||||||||||| |||||||||||||||||||||||| ||||||| |||||| | |||| Sbjct 309 GCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTGTTCGGA 250 Query 75 ATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCT 134 ||||||||||||||||| ||||||| || | |||||||||||||||||| |||| Sbjct 249 TTTACTGGGCGTAAAGGGCGCGTAGGCGGACGGTCAAGTCAGAGGTGAAAGGCCCGGGCT 190 Query 135 CAACCCCGGGAC-TGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATT 193 ||||| ||||| ||| |||||||||| | || |||||| |||| || |||||| Sbjct 189 CAACCT-GGGACGTGCCTTTGAAACTGATTGTCTTGAGTGCGGGAGAGGGTGACGGAATT 131 Query 194 CCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTG 253 || ||||||| |||||||| |||||||||| ||| ||||||| ||||||||||||| Sbjct 130 CCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCGGTGGCGAAGGCGGTCAC 71 Query 254 CTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT 313 |||| | | ||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 70 CTGGCCCGCAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT 11 Query 314 GGTAGTCCAC 323 |||||||||| Sbjct 10 GGTAGTCCAC 1 >seq145483 Length=309 Score = 336 bits (372), Expect = 5e-90 Identities = 260/309 (84%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 15 GCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGA 74 ||||||||||||| |||||||||||||||||||||||| ||||||| |||||| | |||| Sbjct 309 GCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTTGTTCGGA 250 Query 75 ATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCT 134 |||||||||||||||||| ||||||| || | | |||| || |||||||||| |||| Sbjct 249 ATTACTGGGCGTAAAGGGCGCGTAGGCGGAATATCAAGTTAGGGGTGAAAGGCCTGGGCT 190 Query 135 CAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTC 194 ||||| || || || | | |||||| ||||||| | | || || | ||||||| Sbjct 189 CAACCTAGGAACGGCCTCTAAAACTGATAATCTAGAGTCCGGAAGAGGATGGCGGAATTC 130 Query 195 CTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGC 254 ||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||| | Sbjct 129 CTAGTGTAGAGGTGAAATTCGTAGATATTAGGAAGAACACCGGTGGCGAAGGCGGCCATC 70 Query 255 TGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTG 314 ||| | | |||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 69 TGGTCCGGTACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTG 10 Query 315 GTAGTCCAC 323 ||||||||| Sbjct 9 GTAGTCCAC 1 >seq4610 Length=4342 Score = 289 bits (320), Expect = 7e-76 Identities = 303/392 (77%), Gaps = 6/392 (2%) Strand=Plus/Plus Query 18 CCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT 77 |||||||||| |||||||||||||||||||||||| |||| | ||||||||||||||| Sbjct 705 CCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTCCGAGCGTTATCCGGAATC 764 Query 78 ACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAA 137 | |||| |||||||| |||||| || ||||||||| ||||||| || ||||||| Sbjct 765 ATTGGGTTTAAAGGGTCCGTAGGCGGGCCGTTAAGTCAGGGGTGAAATACTGCGGCTCAA 824 Query 138 CCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTA 197 || | ||| |||| |||| || || ||||| || ||||| ||||| | Sbjct 825 CCGTAGAGGTGCCCTTGATACTGGCGGTCTTGAGTGACGGTGGGGCGGCCGGAATATGTG 884 Query 198 GTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGG 257 ||||||||||||||||| ||||||| | ||||||| | |||||||| | | || Sbjct 885 GTGTAGCGGTGAAATGCATAGATATCACATAGAACACCGATCGCGAAGGCAGGTCGC-CA 943 Query 258 ACTGT-AACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 316 || || |||||| |||| | |||||||||||||||| ||| ||||||||||||| ||| Sbjct 944 ACCGTGTACTGACGCTGATGGACGAAAGCGTGGGGAGCGAACGGGATTAGATACCCCGGT 1003 Query 317 AGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCA 376 |||||||||||||||||||| | ||||| |||| |||| | | | ||| ||| | | | Sbjct 1004 AGTCCACGCCGTAAACGATGGACACTAGCTGTC-GGGCCCTT--GGGCT-CGGCGGCCAA 1059 Query 377 GCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || || | |||||| | |||||||||||||| Sbjct 1060 GCGAAAGTGATAAGTGTCCCACCTGGGGAGTA 1091 >seq303 Length=42796 Score = 154 bits (170), Expect = 4e-35 Identities = 236/336 (70%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||| ||| || || ||||||||||||||| | Sbjct 41043 CGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGATGCGAGCGTTATCCGGAATGA 40984 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||||||||||| || ||||||| | | |||||| | | ||| || ||| ||| Sbjct 40983 CTGGGCGTAAAGCGTTTGTAGGTGATCTTCTAAGTCTTGGTTTAAATCATAAAGCTTAAC 40924 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCA---AGTGGAATTCC 195 | || |||| | ||||||| | | || | | ||||||| Sbjct 40923 TTTTAAAAGAGCCAAGATACTGGTTGAATAGAGTGAAATTGAGGTATTTGGGGGAATTCT 40864 Query 196 TAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT 255 ||| | | || ||||| |||| || || ||| ||| |||||||||| | | || Sbjct 40863 TAGAGGAATAGTAAAATGTAACGATACTAAGATGAAGACCGAAGGCGAAGGCGTCATACT 40804 Query 256 GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGG 315 | | ||||||||||| | | ||||||| |||||||||| |||||||| |||| | Sbjct 40803 AAATTTTAACTGACACTCAAGGACGAAAGCTAGGGGAGCAAATGGGATTAGAGACCCCAG 40744 Query 316 TAGTCCACGCCGTAAACGATGAATACTAGGTGTCGG 351 ||||| || ||||||||||| |||||| ||| || Sbjct 40743 TAGTCTTAGCAGTAAACGATGAGTACTAGATGTTGG 40708 >seq105608 Length=359 Score = 150 bits (166), Expect = 4e-34 Identities = 121/145 (83%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 ACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 299 Query 324 GCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACG 383 |||||||||||||| |||| |||| || |||| | | |||| |||||| |||| Sbjct 298 GCCGTAAACGATGAGAGCTAGTTGTCTGGCAGCAT--GCTGTTAGGTGACGCAGCTAACG 241 Query 384 CAATAAGTATTCCACCTGGGGAGTA 408 || |||| ||| ||||||||||| Sbjct 240 CATTAAGCTCTCCGCCTGGGGAGTA 216 >seq4648 Length=200 Score = 141 bits (156), Expect = 2e-31 Identities = 110/130 (85%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 279 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAA 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 200 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTG 141 Query 339 TACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCAC 398 | |||| || ||||| | | |||| ||||| |||||| ||||| |||| | || | Sbjct 140 TGCTAGCCGTTGGGGCAC-TTAGTGTCTCGGTGGCGCAGCTAACGCGTTAAGCACACCGC 82 Query 399 CTGGGGAGTA 408 |||||||||| Sbjct 81 CTGGGGAGTA 72 >seq130150 Length=200 Score = 127 bits (140), Expect = 5e-27 Identities = 109/131 (83%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 279 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAA 338 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTG 60 Query 339 TACTAGGTGTCGGGGCGCATA-AGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCA 397 |||| || ||||| | || ||| || ||||| ||||| ||||| |||| || Sbjct 61 CGCTAGCCGTTGGGGCTCGTAGAGT-CT-CGGTGGCGCAGTTAACGCGTTAAGCGCACCG 118 Query 398 CCTGGGGAGTA 408 ||||||||||| Sbjct 119 CCTGGGGAGTA 129 >seq131744 Length=222 Score = 89.7 bits (98), Expect = 1e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTT 67 || |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 59 GAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTT 1 >seq14957 Length=222 Score = 89.7 bits (98), Expect = 1e-15 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTT 67 || |||||||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 59 GAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGGGCAAGCGTT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201435025920