Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq4610 356 8e-96 seq141112 226 1e-56 seq105679 194 6e-47 seq42531 185 3e-44 seq141111 172 2e-40 seq5547 93.3 1e-16 >seq4610 Length=4342 Score = 356 bits (394), Expect = 8e-96 Identities = 409/540 (76%), Gaps = 20/540 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59 |||||| ||||||||| ||| ||| |||||| ||||||| | |||||||||| Sbjct 3092 CGAGTCTTAACAGGGCGCTTTAGTTAGTGGTAGTAGACGCGAAACCGTGCGATCTACCCA 3151 Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||| |||| ||||| || |||||||| |||||| |||||||| | | |||||||| Sbjct 3152 TGGGCAGGCTGAAGCTGTGGTAACACATAGTGGAGGGCCGAACCCGTTGACGTTGAAAAG 3211 Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179 | ||||||| ||||||||||||||||||||| || ||| || |||||||||| || || Sbjct 3212 TCTTGGGATGACCTGTGGGTAGGGGTGAAAGGCCAATCAAGCTCGGAAATAGCTCGTACT 3271 Query 180 CTCCGAAAACTATTTAGGT--AGTGCCTCA--AGTATCACCATCGGGGGTAGAGC-ACTG 234 | |||||| |||||||| || | | | ||| ||| | |||||||| |||| Sbjct 3272 CCCCGAAATGCATTTAGGTGCAGCGTGTTATTAGTTTCATA----GAGGTAGAGCTACTG 3327 Query 235 TTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA-- 292 | ||| | |||| | | | | |||||| | |||||||||||||| || | Sbjct 3328 AT-TGGATGCGGGGGCTTCACCGCCTACCAATTCCCGACAAACTCCGAATGCT-ATGAAA 3385 Query 293 -GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATC 351 ||| || ||| ||||||||||||||||||||||||| || |||||||| ||||| | Sbjct 3386 CGTTGTAACGC---AGTGAGGGCATGGGTGCTAAGGTCCATGTCCGAGAGGGAAAGAACC 3442 Query 352 CGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCT 411 ||||| | | ||||||| ||| |||| |||||||| | |||| || || ||| Sbjct 3443 CGGACCACCGGCTAAGGTCCCCAAATATATGCTAAGTTGACGAAACGCGGTGGGACTGCA 3502 Query 412 AAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCA 471 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3503 CCGACAGCCAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCA 3562 Query 472 CTAGTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGG 531 || |||||| ||| || |||||||| |||||| | |||| ||||||||| |||| Sbjct 3563 CTGGTCGAGCGGTCCCGCATGGATAATGATCGGGCA-TAAGCATATTACCGAAGCCGTGG 3621 >seq141112 Length=563 Score = 226 bits (250), Expect = 1e-56 Identities = 255/336 (76%), Gaps = 9/336 (3%) Strand=Plus/Plus Query 147 AAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC 206 |||||| || ||||| ||| ||||||||||||| ||||||||||||||||||||| || Sbjct 1 AAAGGCCAATCAAACCCGGAGATAGCTGGTTCTCCGCGAAAACTATTTAGGTAGTGCGTC 60 Query 207 AAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGA--CTTACCA 264 ||||| ||| ||||||||||||||||| |||||||||| | |||| ||||||| Sbjct 61 GAGTATTACCTTCGGGGGTAGAGCACTGGATGGGCTAGGGGGCC---GCGAGGCTTACCA 117 Query 265 AACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTA 324 |||| |||||||||||| | | || | | | ||| || || || |||||||| Sbjct 118 AACCTAACCAAACTCCGAATACCGAAGAG-TAGAGCTCGGCAGACAGACCACGGGTGCTA 176 Query 325 AGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCT 384 ||||||||| ||||||| || | || ||| ||||||||| ||| || | | ||| Sbjct 177 AGGTCCGTGGTCGAGAGGGAAACAGCCCAGACCGCCAGCTAAGGTCCCTAAGTTATGGCT 236 Query 385 AAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 |||| | || || || || || |||||| | |||| |||||||| |||||||||| Sbjct 237 AAGTGGGA--AAGGATGTAGGAAGGCCAAGACAACCAGGAGGTTGGCTTAGAAGCAGCCA 294 Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | |||||||| ||||||||||||||| ||| || Sbjct 295 -CCCTTTAAAGAAAGCGTAACAGCTCACTGGTCTAG 329 >seq105679 Length=553 Score = 194 bits (214), Expect = 6e-47 Identities = 249/337 (74%), Gaps = 10/337 (3%) Strand=Plus/Plus Query 147 AAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTC 206 |||||| || ||||| ||| ||||||||||||| ||||||||||||||||||||| || Sbjct 1 AAAGGCCAATCAAACCCGGAGATAGCTGGTTCTCCGCGAAAACTATTTAGGTAGTGCGTC 60 Query 207 A-AGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGA--CTTACC 263 | | | | ||||||||||||||||| |||||||||| | |||| |||||| Sbjct 61 AGATGGTGGCTCTCGGGGGTAGAGCACTGGATGGGCTAGGGGGGC---GCGAGCCTTACC 117 Query 264 AAACCATTGCAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCT 323 ||||| |||||||||||| | | || || | || || || | |||||||| Sbjct 118 AAACCTAACCAAACTCCGAATACCGAGAAG-TTCAGTCTGGCAGACAGACCGTGGGTGCT 176 Query 324 AAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGC 383 ||||||| || ||||||| || | || ||| ||||||||| ||| || | || || Sbjct 177 AAGGTCCATGGTCGAGAGGGAAACAGCCCAGACCGCCAGCTAAGGTCCCCAAGTCACGGC 236 Query 384 TAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCC 443 ||||| | || || || || || |||||| | |||| |||||||| ||||||||| Sbjct 237 TAAGTGGGA--AAGGATGTGGGAAGGCCAAGACAACCAGGAGGTTGGCTTAGAAGCAGCC 294 Query 444 ATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | | |||||||| |||||| |||||||| ||| || Sbjct 295 A-CCCTTTAAAGAAAGCGTAATAGCTCACTGGTCTAG 330 >seq42531 Length=1504 Score = 185 bits (204), Expect = 3e-44 Identities = 157/192 (82%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGA-CAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| |||||||||| |||| |||| |||||||||||| |||||||| |||| Sbjct 1313 CGAGTCTGAACAGGGCGTTCAGTTCGTGGGATCAGACCCGAAACCGGGTGATCTAGCCAT 1372 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| |||||||| |||||||| | ||||||| |||||||||| |||||||| Sbjct 1373 GGGCAGGCTGAAGGTGGGGTAACACCCACTGGAGGGCCGAACCCACGTTCGTTGAAAAGA 1432 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||||| |||||| |||||||||||||| || ||||| ||| ||||||||||||| Sbjct 1433 ACGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACCCGGAGATAGCTGGTTCTC 1492 Query 181 TCCGAAAACTAT 192 |||||||||| Sbjct 1493 CGCGAAAACTAT 1504 >seq141111 Length=1569 Score = 172 bits (190), Expect = 2e-40 Identities = 155/194 (80%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 |||||| || |||||||| ||| | || ||||||||||||| |||||||| || Sbjct 1376 CGAGTCTTAATAGGGCGACTTCAGTTCGTAGGATTAGACCCGAAACCGGGTGATCTAGCC 1435 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 ||| |||| || ||||| |||||||| | ||| ||| |||||||||||| |||||||| Sbjct 1436 ATGAGCAGGCTGCAGGTGGGGTAACACCCACTGAAGGGCCGAACCCACTAGCGTTGAAAA 1495 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 || ||||||| ||||| |||||||||||||| || ||||| ||| ||||||||||| Sbjct 1496 GCTACGGGATGACTTGTGGTTAGGGGTGAAAGGCCAATCAAACCCGGAGATAGCTGGTTC 1555 Query 179 TCTCCGAAAACTAT 192 || |||||||||| Sbjct 1556 TCCGCGAAAACTAT 1569 >seq5547 Length=16686 Score = 93.3 bits (102), Expect = 1e-16 Identities = 300/456 (66%), Gaps = 26/456 (6%) Strand=Plus/Plus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 ||||||||| | |||||||||| |||| || | ||| | |||| | || | Sbjct 15240 AGACCCGAATCTAAGTGATCTAATCATGTTCAAGGCGAAATTTGTGTAAAAGCAAATGAA 15299 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || | | || | ||| || ||||| | |||||| ||||| ||||||||||| ||| Sbjct 15300 GGCCTGCACTGGTTGATGCTGCAAAATCATCGGATGAAATGTGGTTAGGGGTGAAATGCT 15359 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 |||| ||||| || ||||||||||||| |||| | | ||| | || || || Sbjct 15360 AAACGAACTTAGATCTAGCTGGTTCTCTTTGAAATATGTCGAGGCATAGCTACAGATAAT 15419 Query 214 ACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGC 273 | | | ||||||||||| || | | ||| | | | | || || | | Sbjct 15420 ATTTTTGTAGGTAGAGCACTTTTTTACG--GTGGGCCCTCGGG---TATCATAGTAAGAA 15474 Query 274 AAACTCCGAATG-CGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 |||||||||||| | | ||||||| | ||| | ||| | | ||| ||||| Sbjct 15475 AAACTCCGAATGGCAAAAAAGTTTTATAT-GTAAGTCATACAATGAGAGATAACTTCCGT 15533 Query 333 GCCCGAGAGGAGAAGAATCCGGACT-ATCAGC---TAAGGCCCCGAAATGACAGCTAAGT 388 || ||| ||| | | || |||| | |||||| | |||| | || | Sbjct 15534 TGTAGAAAGG----GAAACAGCCCTCATCACCCAATAAGGCACTTAAATTA----TATTT 15585 Query 389 TAAACTAACGAAGTCTGATTGCTAA----GACAGCTAGGATGTTGGCTTGGAAGCAGCCA 444 |||| | ||| | ||| ||| | |||| |||||| |||||||| |||||||| | Sbjct 15586 TAAAATCACGGTATGTGA--GCTGACCTGGACAACTAGGAGGTTGGCTTAGAAGCAGCAA 15643 Query 445 TTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | | |||||||||||||||| ||||||||||||||| Sbjct 15644 TCC-TTTAAAGAGTGCGTAATAGCTCACTAGTCGAG 15678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1687121525760