Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq141111 237 3e-60 seq42531 212 1e-52 seq4610 127 4e-27 >seq141111 Length=1569 Score = 237 bits (262), Expect = 3e-60 Identities = 250/322 (78%), Gaps = 9/322 (3%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||| ||||||||||| | |||||||||||||||| | | ||||||| Sbjct 771 AGGGCATTTGGTGAATGCCTTGGCGCACAGAGGCGATGAAGGACGTGGCACGCTGCGATA 830 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| | || | ||| |||||||||| |||||||||||||||||||||| | Sbjct 831 AGCCACGGGGAGGG-GCGAGCACCCTTTGATCCGTGGATTTCCGAATGGGGAAACCCGAC 889 Query 121 CCTTT-GGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAA 179 ||||| ||||||| || ||||||||||| | | |||||||| ||| ||||||||| Sbjct 890 CCTTTAGGGTCATCCTTTGGTGAATACATAGCCAGGGGAAGCGAACCCGGTGAACTGAAA 949 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||| | | |||||| || ||||||||||| ||| |||||||||||||||| Sbjct 950 CATCTCAGTAACCGGAGGAAAGGACATCAACCGAGACTCCGTTAGTAGTGGCGAGCGAAC 1009 Query 240 TGGGATGAG--CCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGC 297 ||| || | | | ||| ||| || || | |||| | |||||||| | | || Sbjct 1010 GCGGACCAGGCCAGTGGCCAGAGAGT--AA--GA-ACCGGAAGCGTCTGGAAAGACGCGC 1064 Query 298 CATAGCGGGTGATAGCCCCGTA 319 ||||| |||||||||||||||| Sbjct 1065 CATAGTGGGTGATAGCCCCGTA 1086 >seq42531 Length=1504 Score = 212 bits (234), Expect = 1e-52 Identities = 193/240 (80%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||| || | | |||||| ||||||||| | | ||||||| Sbjct 709 AGGGCATTTGGTGGATGCCTCGGTGTCGAGAGGCGAAGAAGGACGTGGCACTCTGCGATA 768 Query 61 AGCTGCGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 ||| |||||||| |||| | | ||||||||||| |||||||||||||||||||||| Sbjct 769 AGCCGCGGGGAGATGAG--AGCGATCTTTGATCCGCGGATTTCCGAATGGGGAAACCCGA 826 Query 120 CCCTTT-GGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAA 178 |||||| ||||||| | | | ||||||||||| ||| | |||||| ||| |||||||| Sbjct 827 CCCTTTAGGGTCATCGTACGGTGAATACATAGCCGTGCGAGGCGAACCCGGGGAACTGAA 886 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||| |||| | | |||||| || ||||||||||| ||| |||||||||||||||| Sbjct 887 ACATCTCAGTACCCGGAGGAAAGGACATCAACCGAGACTCCGTTAGTAGTGGCGAGCGAA 946 >seq4610 Length=4342 Score = 127 bits (140), Expect = 4e-27 Identities = 177/244 (73%), Gaps = 8/244 (3%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| |||||||| ||| | |||||| ||||||||| || ||||| |||| ||| Sbjct 2445 ATGGGGGATGCCTAGGCTCCCAGAGGCGAGGAAGGACGTGATAAGCTGCGAAAAGCCGCG 2504 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||| | ||| | || | |||||||| ||| ||||||||||| ||||| | ||| Sbjct 2505 GGGATCG-GCACATACGATATGATCCGCGGATGTCCGAATGGGGCAACCCACCATGTTG- 2562 Query 128 GTCATTGCATGCTGAATACATAGGTAT-GCAAAGCGAACGCGGCGAACTGAAACATCTAA 186 | ||||| | || | || || | | |||||| ||| |||||||||||||||| Sbjct 2563 ---AAGGCATGGT--ATCCCGAGCGATCGGGAGGCGAACCCGGTGAACTGAAACATCTAA 2617 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATG 246 ||||| | |||| ||||| ||| | |||||| ||||| ||||||||||| ||| Sbjct 2618 GTAGCCGGAGGAGGAGAAAACAAGAGTGATTCCGGGAGTAGCGGCGAGCGAAACCGGAGA 2677 Query 247 AGCC 250 |||| Sbjct 2678 AGCC 2681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917052799040