Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq137457 223 1e-55 seq144550 185 3e-44 seq133594 181 3e-43 seq126212 161 3e-37 >seq137457 Length=218 Score = 223 bits (246), Expect = 1e-55 Identities = 128/131 (98%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 218 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 159 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 158 TTACCCGCGCTTGTTTGAATTTCATCACTTTGACATTCAGGGCACTGGGCAGAAATCACA 99 Query 523 TTGCGTCAACA 533 ||||||||||| Sbjct 98 TTGCGTCAACA 88 >seq144550 Length=216 Score = 185 bits (204), Expect = 3e-44 Identities = 177/223 (79%), Gaps = 13/223 (6%) Strand=Plus/Minus Query 123 GATCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCG---GTGAAGACCAG-TTCCGC 178 ||||||| ||||||| | ||||| ||| ||| ||| |||| ||| ||| | Sbjct 214 GATCGGCTCGCGAAGAGCTTTAACACCA--AAACTGTCACAAGTGA----CAGCTTCAAC 161 Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238 |||| || ||||||||| ||| ||| |||||||| ||||| || || | | | Sbjct 160 TTCACGGAATAAGTAAAATGACGCTAAAAGTAGTGGTTTTTCAGGCTCGACGGATC---T 104 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 103 CCCACTTAGGCTACACCTCTTAGGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 44 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 |||||||||||||||||||||| |||||||||||||||||| Sbjct 43 GGGTCTTCTTTCCCCGCTGATTAGTCCAAGCCCGTTCCCTTGG 1 >seq133594 Length=216 Score = 181 bits (200), Expect = 3e-43 Identities = 179/227 (79%), Gaps = 21/227 (9%) Strand=Plus/Plus Query 123 GATCGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCG---GTGAAGACCAG-TTCCGC 178 ||||||| ||||||| | ||||| ||| ||| ||| |||| ||| ||| | Sbjct 3 GATCGGCTCGCGAAGAGCTTTAACACCA--AAACTGTCACAAGTGA----CAGCTTCAAC 56 Query 179 TTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA--CTTGCGCCGAAACGG 236 ||||| || ||||||||| | | ||| |||||||| ||||| |||| |||| Sbjct 57 TTCATGGAATAAGTAAAATGATGCTAAAAGTAGTGGTTTTTCAGGCTTG-------ACGG 109 Query 237 --CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||||||||| |||||||||| | ||||||||||||||||||| ||||||||||||| Sbjct 110 ATCTCCCACTTAGGCTACACCTCTTAGGTCATTTCACAAAGTCGGATTAGAGTCAAGCTC 169 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 |||||||||||||||||||||||||| |||||||||||||||||| Sbjct 170 AACAGGGTCTTCTTTCCCCGCTGATTAGTCCAAGCCCGTTCCCTTGG 216 >seq126212 Length=338 Score = 161 bits (178), Expect = 3e-37 Identities = 124/147 (84%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||||||||||||||| |||| | |||||||||||||||||| | Sbjct 174 CTTTTAGTCTACAAGAGATTTCTGTTCTCATTGAGCTCGCCTTAGGACACCTGCGTTGTT 115 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| ||||| || | |||| Sbjct 114 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACTATGTCTTCCGCATTGATC 55 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAA 153 ||| ||||||| | ||||| ||| || Sbjct 54 GGCTCGCGAAGAGCTTTAACACCAAAA 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1632801325120