Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq9707 307 4e-81 seq82215 205 3e-50 seq109490 201 4e-49 seq4610 132 2e-28 seq303 125 2e-26 seq80947 113 2e-22 seq61608 105 2e-20 seq12707 105 2e-20 seq104763 104 8e-20 seq113736 102 3e-19 seq5547 98.7 3e-18 >seq9707 Length=1225 Score = 307 bits (340), Expect = 4e-81 Identities = 347/457 (76%), Gaps = 16/457 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||| | |||| | ||| ||||||||| ||||||||| || ||||| | | | ||||| Sbjct 445 TCGGCCTGTATGCCTCACAGTCAAGCGCCCTTGTGCCATTGCACTCTGCGCACGGTTGCC 386 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 || | |||||||| |||||||| ||||||||||| ||| ||||| | ||| |||||| Sbjct 385 AAGCGTGCTGAGGGCACCTTTGGAAGCCTCCGTTACCCTTTTGGAGG-CGACCACCCCAG 327 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 | ||||||||||||| ||||||||||| | || | ||| ||||| || Sbjct 326 TCAAACTACCCACCACGCACTGTCCCC---CGAGTACTCGGG-----GTTAGGC--CCCG 277 Query 181 TACGGTCAGAG--TGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATA 238 || || || |||||||||||||||| ||||||| | || ||| | ||| || | Sbjct 276 GACAAACAAAGGCTGGTATTTCAACAACGGCTCCACACCGCCTGGCGACGGCGCTTCGAA 217 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | |||||| |||||||||||| || || | |||||| |||||||||| ||||| Sbjct 216 GCCTCCCAGCTATCCTACACATTGGTTGCCCAAGGTCAATACGAAGCTATAGTAAAGGTG 157 Query 299 C-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | |||||||||||||||| | ||| | ||| ||||||| || |||| ||||||||| Sbjct 156 CACGGGGTCTTTTCGTCCCACTGCGGGTAACCGGCATCTTCACCGATACTACAATTTCAC 97 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTA 416 || | |||| ||||||| | || ||||| | ||||||||||||||||||||||| Sbjct 96 CGAGATCATGGTCGAGACAGT-GTCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTA 38 Query 417 CCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||||||||||||||||||||||||| ||||||| Sbjct 37 CCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 1 >seq82215 Length=341 Score = 205 bits (226), Expect = 3e-50 Identities = 253/342 (74%), Gaps = 3/342 (1%) Strand=Plus/Minus Query 89 TCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCA 148 |||||||| ||||||||| | ||||||||||| ||||||||||||| ||| ||||| Sbjct 341 TCCGTTACTCTTTGGGAGG-CGACCGCCCCAGTCAAACTACCCACCATGCAGGGTCCCGG 283 Query 149 ACCCAGAT-CATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGGTATTTCAACAACG 207 | || | | || || || ||||||| ||| | | | || | |||||||||| Sbjct 282 ATCCGGTTTCACGGACCGCGGTTAGACATCAGAAAAGATAAGGGCGGTATTTCAAGGGTA 223 Query 208 ACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCAC 267 |||||| || ||| || ||| || ||||| ||||||||||||| || | Sbjct 222 GCTCCACCCGAGCTGGCGCCCGGGCTTCAAAGCCTCCCGCCTATCCTACACATGCCTGTC 163 Query 268 CGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAA 326 | ||||||| | | ||| | |||| ||||| | |||||||||| |||| ||||| | | Sbjct 162 CTAATGCCACTGCAAAGTTGTAGTAAAGGTGCACGGGGTCTTTCCGTCTGACCGCGGGTA 103 Query 327 ACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGT 386 | ||||||| || | | | ||||||| | | | | || | ||||||| ||| ||| Sbjct 102 GCCCGCATCTTCACGGGCAATTCAATTTCGCTGAGTCGATGCTGGAGACAGTGGGGAAGT 43 Query 387 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428 |||||||||||||||||||||||||||||||||||||||||| Sbjct 42 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1 >seq109490 Length=340 Score = 201 bits (222), Expect = 4e-49 Identities = 253/342 (74%), Gaps = 4/342 (1%) Strand=Plus/Minus Query 89 TCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCACCAGGCACTGTCCCCA 148 |||||||| ||||||||| | ||||||||||| ||||||||||||| ||| ||||| Sbjct 340 TCCGTTACTCTTTGGGAGG-CGACCGCCCCAGTCAAACTACCCACCATGCAGGGTCCCGG 282 Query 149 ACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCA-GAGTGGTATTTCAACAACG 207 |||| | | | ||||| |||||| | | || | || | | |||||||||| | Sbjct 281 ACCCGGGTAACGGGCCGCGGTTAGGCG-CTAAGACAGGCAAGGGCGGTATTTCAAGGTTG 223 Query 208 ACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCAC 267 |||||| | || ||| || || || ||||| |||||||||||||| ||| | Sbjct 222 GCTCCACCAGAGCTGGCGCCCTGGCTTCCAAGCCTCCCGCCTATCCTACACAAGCCGGTC 163 Query 268 CGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAA 326 | | | || | | ||||| |||| ||||| | |||||||||| |||| ||||| | | Sbjct 162 CTAGCGTCACTGCAAAGCTGTAGTAAAGGTGCACGGGGTCTTTCCGTCTAACCGCGGGTA 103 Query 327 ACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGT 386 ||||||| || | | ||||||| | | | ||| | | ||||||| ||| ||| Sbjct 102 CTCCGCATCTTCACGGAGAGTTCAATTTCGCTGAGTCTGCGTTGGAGACAGTGGGGAAGT 43 Query 387 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 428 |||||||||||||||||||||||||||||||||||||||||| Sbjct 42 CGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAA 1 >seq4610 Length=4342 Score = 132 bits (146), Expect = 2e-28 Identities = 116/143 (81%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 4342 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCG 4283 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 || ||| || | | ||| ||| | | ||||| ||| ||||||||||| ||||||| Sbjct 4282 GTTCAACGCTTCCCCCGCCA-ATGGCGGGTTCACGTCTCCCCTTAACCTTCCGGCACCGG 4224 Query 541 GCAGGCGTCAGTCCGTATACCTC 563 ||||| ||||| || ||||| || Sbjct 4223 GCAGGTGTCAGGCCCTATACGTC 4201 >seq303 Length=42796 Score = 125 bits (138), Expect = 2e-26 Identities = 108/134 (81%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 331 GCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390 ||||||| || ||||| ||||||||| | | ||||||||| ||||||| Sbjct 42663 GCATCTTCACAGACACTGCTATTTCACCGACTTTCTCTTTGAGACAGTGTTTAAGTCGTT 42722 Query 391 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 450 ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct 42723 ACGCCTTTCATGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 42782 Query 451 TAGTTACCACCGCC 464 ||||||| ||||| Sbjct 42783 TAGTTACGGCCGCC 42796 >seq80947 Length=217 Score = 113 bits (124), Expect = 2e-22 Identities = 102/127 (80%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 13 TCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACCAGGCTGAG 72 ||||||||||| || ||| ||| || |||||| || |||||| || ||||| |||| Sbjct 127 TCTCGCAGTCAGGCAGGCTTATGCCATTGCACTCAACAGCTGATTTCCGACCAGCTTGAG 68 Query 73 GGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAAACTACCCA 132 ||||| | ||||||||||||| ||||||| ||| ||||||||||| |||||||||| Sbjct 67 CCTACCTTCGCGCGCCTCCGTTACTCTTTGGGA-GGCGACCGCCCCAGTCAAACTACCCA 9 Query 133 CCAGGCA 139 ||| ||| Sbjct 8 CCATGCA 2 >seq61608 Length=535 Score = 105 bits (116), Expect = 2e-20 Identities = 108/144 (75%), Gaps = 19/144 (13%) Strand=Plus/Minus Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 535 ACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCG 476 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| || | | | ||| ||||||||||||||| ||||||| Sbjct 475 ATT----------CAGAGCTTG---------CACCCCTCCTCTTAACCTTCCGGCACCGG 435 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||| || ||||| ||| Sbjct 434 GCAGGCGTCAGACCCTATACGTCG 411 >seq12707 Length=528 Score = 105 bits (116), Expect = 2e-20 Identities = 105/139 (76%), Gaps = 19/139 (14%) Strand=Plus/Minus Query 426 GAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTAC 485 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct 528 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATT-- 471 Query 486 CCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGG 545 ||| | | |||| | |||| |||||||||| |||||||||||| Sbjct 470 -CGCAGCTCTCACCGC----------------TCCTTTTAACCTTCCGGCACCGGGCAGG 428 Query 546 CGTCAGTCCGTATACCTCG 564 |||||| || ||||| ||| Sbjct 427 CGTCAGACCCTATACGTCG 409 >seq104763 Length=217 Score = 104 bits (114), Expect = 8e-20 Identities = 107/139 (77%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||||||||| || ||| ||| || |||||| || | ||| || Sbjct 79 TCGACCTGTCGGTCTCGCAGTCAGGCGGGCTTATGCCATTGCACTCAACAGCCGATGTCC 138 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| | |||| ||| | | ||||||||||||| ||||||| ||| |||||||||| Sbjct 139 GACCGGCTTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTGGGA-GGCGACCGCCCCAG 197 Query 121 TTAAACTACCCACCAGGCA 139 | ||||||||||||| ||| Sbjct 198 TCAAACTACCCACCATGCA 216 >seq113736 Length=463 Score = 102 bits (112), Expect = 3e-19 Identities = 103/139 (74%), Gaps = 19/139 (14%) Strand=Plus/Minus Query 426 GAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTAC 485 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct 463 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATT-- 406 Query 486 CCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGG 545 || | ||||| |||| |||||||||| |||||||||||| Sbjct 405 -----------------CGGAGCTCTCACCCCTCCTTTTAACCTTCCGGCACCGGGCAGG 363 Query 546 CGTCAGTCCGTATACCTCG 564 |||||| || ||||| ||| Sbjct 362 CGTCAGACCCTATACGTCG 344 >seq5547 Length=16686 Score = 98.7 bits (108), Expect = 3e-18 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 412 ACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACT 471 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 16686 ACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACC 16627 Query 472 GGGGCTTCA 480 |||||||| Sbjct 16626 AGGGCTTCA 16618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699902749440