Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4610 280 3e-73 seq303 145 2e-32 seq131744 105 1e-20 seq83951 105 1e-20 seq38801 105 1e-20 seq14957 102 2e-19 >seq4610 Length=4342 Score = 280 bits (310), Expect = 3e-73 Identities = 254/317 (80%), Gaps = 2/317 (1%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCC-ACACG 59 ||||||||||||||||||||||| | ||||||| || ||||| || ||| | ||||| Sbjct 728 GGCTGCTGGCACGGAGTTAGCCGGTCCTTATTCTTACGGTACCGTCA-GCTATCTACACG 670 Query 60 TGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACG 119 | || | ||| ||||| || ||||| |||||| | |||||| || || ||| |||| Sbjct 669 TAGATAGGTTTCTTCCCGTACAAAAGCGGTTTACGACCCGTAGGGCCGTCTTCCCGCACG 610 Query 120 CTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTA 179 | | ||||||| |||| | || |||||| |||||||||||||||||||||||||||| Sbjct 609 CGGCATGGCTGGATCAGGCCTCCGCCCATTGTCCAATATTCCTCACTGCTGCCTCCCGTA 550 Query 180 GGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCA 239 ||||| ||| |||||||||||| ||| ||||||||| | |||||||| |||||| ||| Sbjct 549 GGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCCCCCTCTCAGGGCCCCTAACCA 490 Query 240 TCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATCGTAC 299 |||| | || ||||||||||||||||||| || | ||||||| |||||| ||||| Sbjct 489 TCGTCGCCTTGGTGGGCCGTTACCCCGCCAACAAGCTAATGGTACGCATGGCCATCCCTG 430 Query 300 ACCGATGAATCTTTAAT 316 ||||| |||||||||| Sbjct 429 TCCGATAAATCTTTAAT 413 >seq303 Length=42796 Score = 145 bits (160), Expect = 2e-32 Identities = 137/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 105 CCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCA 164 |||||||||||||| | | | | |||| || ||| |||||| ||||||||||| Sbjct 41118 CCTTCATCCTTCACTCAGCGTCACACTGTCAGGCTTTCGCCCATTGCAGAATATTCCTCA 41177 Query 165 CTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCT 224 ||||||||| |||||| ||||||| |||||||||||| ||||||||| || | |||||| Sbjct 41178 CTGCTGCCTTCCGTAGAAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCGGGTCATCCTCT 41237 Query 225 CAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAAT 279 |||| || ||| | || | | |||||| ||| ||||| | ||||||| ||||| Sbjct 41238 CAGATCCGCTACCGATTATCGTCTAGGTAAGCCTTTACCTCACCTACTAACTAAT 41292 >seq131744 Length=222 Score = 105 bits (116), Expect = 1e-20 Identities = 98/123 (80%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||| || || ||||| || ||||| | ||||||| |||| | | |||| Sbjct 96 TTTACAACCCTAAGG-CCTTCTTCACGCACGCGGCATGGCTGGATCAGGGTTGCCCCCAT 154 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||||||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 155 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 214 Query 209 TGG 211 ||| Sbjct 215 TGG 217 >seq83951 Length=556 Score = 105 bits (116), Expect = 1e-20 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 176 CGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTA 235 ||||||||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| Sbjct 1 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 60 Query 236 TCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGC 286 | ||||| |||| ||| |||| ||||||| || |||||||||| ||||| Sbjct 61 TAGATCGTCGGCTTGGTAGGCCATTACCCCACCAACTACCTAATCTAACGC 111 >seq38801 Length=4489 Score = 105 bits (116), Expect = 1e-20 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 176 CGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTA 235 ||||||||| ||| |||||||||||| ||| ||||| || | |||||||||| | ||| Sbjct 1 CGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTA 60 Query 236 TCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCATC 295 | |||| || || |||||||| ||||||| || || | ||||| | |||| |||||| Sbjct 61 CCGATCGAAGCCTTGGTGGGCCATTACCCCACCAACAAGCTAATCGGACGCGGGCCCATC 120 Query 296 GTACACCGATGAATCTTT 313 | |||| ||||||| Sbjct 121 CCAGGGCGATAAATCTTT 138 >seq14957 Length=222 Score = 102 bits (112), Expect = 2e-19 Identities = 97/123 (79%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 89 TTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCTCGTCCAT 148 ||||||| || || ||||| || ||||| | ||||||| |||| | | |||| Sbjct 96 TTTACAACCCTAAGG-CCTTCTTCACCCACGCGGCATGGCTGGATCAGGGTTGCCCCCAT 154 Query 149 TGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATG 208 || |||| ||||| |||||||||||||||||||||| ||| |||||||||||| ||| || Sbjct 155 TGTCCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTG 214 Query 209 TGG 211 ||| Sbjct 215 TGG 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067232177280