Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq7091 170 5e-38 seq36698 86.0 2e-12 >seq7091 Length=10687 Score = 170 bits (188), Expect = 5e-38 Identities = 307/449 (68%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 37772 GGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTT 37831 || ||||| | |||| || ||||| ||||| | | || ||||| | || || || Sbjct 9927 GGTTTTCCCATGCTGACCACCAAAAAGCTGCATCTGAGGTCGATCATCCACGAGCTTCTG 9868 Query 37832 TGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGG 37891 ||||| || | ||||| || ||| || |||| || ||| || |||||| ||| ||| Sbjct 9867 TGGTTCCTACAGGGCGACACCAACATCGCCTATCTGAAGGCCAACGGCGTGCGGATCTGG 9808 Query 37892 GATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCG 37951 ||||| ||||| || || |||||||| || || ||| ||||||| ||||| ||||| || Sbjct 9807 GATGAATGGGCCGATGAGAACGGCGACCTGGGGCCGGTTTACGGGGCGCAGTGGCGGTCC 9748 Query 37952 TGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAAA 38011 ||| || | ||||| ||||| |||||| | | | || | | || Sbjct 9747 TGGCCGGCGCCGGACGGTCGCCATATCGATCAGATCAGCCAGATCCTGGATCAACTGAAG 9688 Query 38012 CGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAG 38071 || ||||| |||| |||||||| ||||| || |||||||| || || | || Sbjct 9687 CGCAATCCCAATTCCCGCCGGCTTGTGGTGTCGGCCTGGAATGTGGCGGAGATCGAGCGC 9628 Query 38072 ATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCA 38131 ||| ||||||||||||||| | || |||||||| |||||| | |||||| | || Sbjct 9627 ATGGCCTTGCCGCCGTGTCATTGCCTGTTCCAGTTCTACGTCGCCGAGGGCCGGCTTTCC 9568 Query 38132 TGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGC 38191 ||| | | |||||| || || | ||| | || |||| || |||||||| | Sbjct 9567 TGCCAGCTCTATCAGCGCAGCGCCGACATCTTTCTGGGCGTGCCCTTCAACATCGCCTCC 9508 Query 38192 TACGCGCTGTTGACGCATATGGTAGCCCA 38220 || |||||| ||||| ||| | ||||| Sbjct 9507 TATGCGCTGCTGACGATGATGATGGCCCA 9479 >seq36698 Length=9795 Score = 86.0 bits (94), Expect = 2e-12 Identities = 202/299 (68%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 37652 ATGAAACAATATTTAGACTTGCTGCAAGACATCTTA--GAAAACGGCGTCGAAAAAGAAG 37709 ||||||||||| || || ||| ||| ||| || |||||||| ||||||| ||| Sbjct 8684 ATGAAACAATACCACGATTTACTG-AAG-CATGTTCTTGAAAACGGTAACGAAAAACAAG 8741 Query 37710 ACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAG 37769 | | || || ||||| || || || || ||| | || || || | | Sbjct 8742 ATAGGACAGGAACTGGCACTCTAAGTGTATTTGGTTATCAGATGCGATTTGACCTTGGCG 8801 Query 37770 ATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGC 37829 | || ||||| | || || || |||||||||||| | ||||| | | ||||| | Sbjct 8802 AAGGTTTTCCCATGGTCACTACCAAAAAATTGCATTTGAAATCCATTGTCCACGAACTTC 8861 Query 37830 TTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACG-ATT 37888 |||||||| | || |||||||| || | | ||| | |||||||| || || ||| || Sbjct 8862 TTTGGTTTCTTAAGGGCGATACTAATATTGGATATCTTCAGGAGAACGGGGT-ACGCATC 8920 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCG 37947 ||| | || ||||| || ||||| || || | || || | |||||| |||||||| Sbjct 8921 TGGAACGAATGGGCCGATGAAAATGGAGACTTGGGACCCGTCTACGGCCACCAATGGCG 8979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130412432468500