Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq83140 196 4e-45 seq10895 123 2e-23 seq21114 100 2e-16 seq23761 86.0 5e-12 seq15169 86.0 5e-12 >seq83140 Length=1468 Score = 196 bits (216), Expect = 4e-45 Identities = 330/475 (69%), Gaps = 2/475 (0%) Strand=Plus/Plus Query 66037 CTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCC 66096 ||| ||||| | || |||||||||||||| ||||| || || | ||| || Sbjct 976 CTCATCAGGGGATGTGTACTCGACAATTTCAGTGCAGAGGTTGGATGACTTGATGCACCC 1035 Query 66097 CAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156 || |||||||| || ||| | ||||| || || ||||||| |||||| || || || Sbjct 1036 CAGGTTCTGTTGGTTGGACTTTCTGTTGCACGCGTCTTTGTACAGCATGTAGGGGGTACC 1095 Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTAC 66216 |||||||| ||| ||| | || | ||| || | ||| |||| || | | | Sbjct 1096 GGTCTCAATCTGGCTCTCCAGAATTTTGAACCACAGCCACTGGGCCCTCACGGT-CTTCC 1154 Query 66217 CGCCC-TACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTT 66275 ||| | ||| | ||| | | || || || || || ||||| || Sbjct 1155 TTCCCCTGCCTGTCTTCTCGAATTCCTCATACTTTCTCTCAAACTCCTCCCCCCAGCATT 1214 Query 66276 CGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACAC 66335 | ||||| | || |||| || || ||||||| || ||| || || |||| | || | Sbjct 1215 CAGACAGCCCAGGGCACTCGTTCGGGCACATCAACGTCCAGTCTCCGTCCTCCTTCACTC 1274 Query 66336 GACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCT 66395 | | ||| || || ||||| |||||||| || |||||||||| | |||| ||||||| Sbjct 1275 GTCTCATGAACAGGTCAGGAATCCAGAGACCGAAGAAGAGATCCCTCGCTCTGTGCTCCT 1334 Query 66396 CAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCA 66455 | ||||||| || || ||||| || ||||| |||| || ||| | ||||| || |||| Sbjct 1335 CCTTGCCGTGGTTCTTCCGCAAATCCAGGAAGTCAAGGAGGTCTGAGTGCCAGGGCTCCA 1394 Query 66456 GGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGC 66510 ||||||||||||| |||||| | |||||||| || |||||||||||||| || || Sbjct 1395 GGTAGATGGCGAAGGAGCCCTTGCGTTTGCCTCCTCCTTGGTCGACGTACCGGGC 1449 >seq10895 Length=16309 Score = 123 bits (136), Expect = 2e-23 Identities = 750/1188 (63%), Gaps = 55/1188 (5%) Strand=Plus/Minus Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 ||||| ||||||| ||| | | | ||| |||||||| ||| ||| ||||| | || Sbjct 11909 AACTCCCCGGACAATACCCTTCTGGTATAAATGTTGGAGGTGTAGGGCTCAAAACACTCG 11850 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 |||| || || ||||||| ||||| || || ||||||||||||||||||| ||||| Sbjct 11849 TTGTTCCCCAGTATTTGGGATGTAGACGCGGTAGGCATGGGAGCGACCAACAGGGAGTTG 11790 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCA---CATCGGTTTA 65611 |||| || || || | | | ||||||| ||||||| ||| || Sbjct 11789 CGCACACCATTTTTTATGACCTGCTTGCGCAATTTTTCCCAGTCCCAACGGCCCGAAAGT 11730 Query 65612 TCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG--GCCGGTGAAC 65669 || ||| | | | ||| | || ||||| | || | | ||| ||||| | Sbjct 11729 TCTTCGTCCTTGATACCCCAAAGATTATGTTGAA--ATTTCCCTTCTGAAATTGGTGAGC 11672 Query 65670 CGAGGAAACTATCGTACACTCCCTCCTCCTTGGC-----AAGTTGACAGCTGGTCTCGAG 65724 | || | ||| ||||||| | ||||| | || ||| ||| | Sbjct 11671 CCTTAAAGGAAGAGTAGGCTCCCTCTACTTTGGCCTCCTCCATAGA-AGC-GGT---AAC 11617 Query 65725 TGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTC 65784 |||||| | || | ||| || ||||| | | || | ||| |||||||| || Sbjct 11616 CGCGGCATAGTACAAGGTTTCAAAAATCTCTTGGTTCAATTCCTTGGCCTCATCACTGGT 11557 Query 65785 GTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGG 65844 | |||| || || || | ||| || || ||||| ||||| ||||| | ||| || || Sbjct 11556 AAAGGGCAAACGCAACATAATAAAGGTATCTGCCAGTCCTTGGACTCCCAAACCTATTGG 11497 Query 65845 ACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 | ||| |||| ||||||| | ||| || ||| ||||||||||| |||| || | Sbjct 11496 CCTATGGCGCATATTGGAATTTTCCGCTTCCTTTACGGGGTAGTAATTCCTATCAATGAC 11437 Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAATCAAAA 65962 | ||| | || |||||| | | | || | | ||||| | | |||||| Sbjct 11436 CCTATTAAGGTTCTTGGTCACC-CGT-TTTGTAACCTTGAACAATTCCTTGTGATCAAAT 11379 Query 65963 TGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGG 66022 | |||| |||||| ||||||| || | ||| || | | Sbjct 11378 T------------------TGCCCCCTTTAACAAACATGGGAAGAGCTATAGAGGCCAAG 11337 Query 66023 TTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTG 66082 || || || |||| || || || | |||||| || | || ||||| || ||||| Sbjct 11336 TTACAAACCGCTACTTCATCGGGGGAGGTATATTCCAATATCTCGGTACAAAGATTGGAA 11277 Query 66083 CAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATC 66142 | || || || ||||| |||| ||||| || || |||||| |||||||| || | | Sbjct 11276 GATCGGATAGTACCCAAGTTCTTCTGATTGCTTTTACGATTGGCCGCATCCTTATAAAGC 11217 Query 66143 ATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCC 66202 || || || || || ||||||| ||||| || | || | ||| | | | | ||| Sbjct 11216 ATATAGGGCGTTCCCGTCTCAATCTGGGATTCCAATATTTTTTCCCATAAATCCCTGGCC 11157 Query 66203 TTCACCGTACGTACCGCCCT--ACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGG 66260 || ||||| | | |||| ||| ||| || || | || || | ||| || Sbjct 11156 TTTACCGT-TTTGCGACCCTTATCCTCTGC-CTCATATTTCAAATATAGTTTTTCAAA-- 11101 Query 66261 ATTCACCCCATACTTCG--GACAGACATGGACACTTGTGTGGACACATCAGCGACCAATC 66318 | | | | | || | ||| | |||||| | | || ||||| | | |||||| Sbjct 11100 TTCCTCACTGTGATTTGAAAACAATCCTGGACATTCATTGGGGCACATTAAGGTCCAATC 11041 Query 66319 ACCATCCTGTTCTACACGACG---CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 ||| || || |||| || ||| || | ||| || ||||| | ||||||||| || Sbjct 11040 TTCAT--TGGCCTCCACG-CGCTTCATGAACAAATCTGGAATCCACATGGCGTAGAACAG 10984 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGAT 66435 ||| || || || || || | ||||| || || ||| || | || ||||| || Sbjct 10983 ATCACGGGCACGCATTTCTTCCTTTCCGTGGTTCTTCTTCAATTCCAAAAAGTCAAAAAT 10924 Query 66436 GTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTG 66495 || |||||||| || || | || ||||| || || | || || ||||| ||||| Sbjct 10923 ATCCGCATGCCAAGGCTCTACATAAATGGCAAAACTTCCTTTTCGCTTCCCGCCTCCTTG 10864 Query 66496 GTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTT 66555 || |||||||| || | || || || | | ||| || || | || || || | Sbjct 10863 ATCAACGTAGCGTGCCGTGTCATTAAATACCCTTAGCATAGGGACAATACCATTGGAAGT 10804 Query 66556 GCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAA 66602 |||||||| ||| | || ||||| ||| ||||| | || ||||| Sbjct 10803 ACCATTGGTACCGGCTATATATGATCC-CGTAGCCCGAACATTGTGAA 10757 >seq21114 Length=6667 Score = 100 bits (110), Expect = 2e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 || || | ||| || || || | |||||| || ||||| ||| || || || ||||| Sbjct 571 GAGGCCAAGTTACACACGGCGACCTCGTCGGGTGCGGTGAACTGCACGATCTCCGTGCAG 512 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 || || ||||||| ||||||||||| || || |||||||| | || ||||| ||| Sbjct 511 AGGTTGCTGCAGCAGATGGTGCCCAACCCCTTCTGGTTACTCTTCTGGTTACATGCGTCC 452 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGA 66171 ||| | | |||||| |||||||| ||||| | ||| || Sbjct 451 TTGAAGAGCATGTAGGGAGTGCCCGTCTCGATTTGAGA 414 >seq23761 Length=1799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 61207 GTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC 61266 |||||||| ||||| || ||||| ||||| ||||| ||||| | || | ||| Sbjct 1403 GTGTTGGCTTTCTTCGCGGCTTCCGACGGCATCGTGCTGGAGAACCTGGCGGCCAGGTTC 1462 Query 61267 GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAG 61326 |||||||| || || | ||||| | |||||||| |||||||| ||||||||| Sbjct 1463 CTTCAGGAGGTCCAGATGCCTGAGGCCAGGGCCTTCTACGGATTCCAGATCGCCATGGAG 1522 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || ||||||| || ||||||| | | ||||| ||||||| Sbjct 1523 AACATCCACTCTGAAGTGTACAGCCTGTTGATCGACCAGTACATC 1567 >seq15169 Length=4399 Score = 86.0 bits (94), Expect = 5e-12 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 65434 GAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTC 65493 ||| || || || || ||||| | | ||||||||||| |||| ||| |||||||| || Sbjct 334 GAATTCTCCAGAGAGCACACGTCTGTAGTAGATGTTGGAGGTGAAGGGCTCAAAGGACTC 275 Query 65494 AGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTT 65553 | ||||||| || || ||| || |||||||| |||||||| |||| | | ||||| Sbjct 274 ATTGTTGCCCAGGATCTGGCTGGTCGATGCAGTGGGCATGGGGGCGAGGAGGAGGGAGTT 215 Query 65554 TCGCAATCCG 65563 | || |||| Sbjct 214 CCTCAGTCCG 205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396857234141600