Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq13327 425 6e-114 seq303 369 4e-97 >seq13327 Length=3816 Score = 425 bits (470), Expect = 6e-114 Identities = 665/949 (70%), Gaps = 2/949 (0%) Strand=Plus/Minus Query 159832 CCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACTAT 159891 ||| || ||| |||| ||||| || | | ||| | ||||| | || |||| ||| Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAG-TAT 2738 Query 159892 C-TGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAAC 159950 | || ||||| | || || | || || || || || || || ||||| || ||||| | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 159951 CCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTCTT 160010 | || | || || || | ||||| || || || ||||| || || || || || || Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 160011 CCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTGGC 160070 | || || |||||| | || || ||| | | || || || | | || || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 160071 TCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGCCT 160130 | |||||||| || |||| |||| |||| || | || ||| | ||||| | | | Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 160131 ATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGTTG 160190 || | ||||||||||| ||| | ||||||| | || |||||||| || || | || | Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 160191 CATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCAGG 160250 | | |||||| ||||| || || || || |||||||| || || ||||| |||| || | Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 160251 GTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGTAT 160310 | ||||| || |||| |||||||| || || ||||| || || |||| ||||| |||| Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 160311 TCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGTAT 160370 |||| ||||| || |||||| | ||||| || ||||||||| || || || || |||| Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 160371 TCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAGAG 160430 | || |||||| | || |||||||||||||||| | ||||| || | | | | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 160431 AGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGACTT 160490 ||| | ||| ||| || | || ||||| || || ||||| || || | || || | Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 160491 ACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTTTA 160550 | || ||||| || || || || |||||||| ||| | ||||| |||| ||| |||| Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 160551 ACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTTCA 160610 | |||||||| ||| | ||||||||||| || ||| || || ||||||||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 160611 CTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTCCA 160670 | || | || || ||| ||||| |||||||| ||||| ||||| |||||||| || | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 160671 TCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGGTC 160730 || | || |||||| || | | ||| || || | | || || || || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 160731 TGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGA 160779 | || |||||||| ||||| ||||||||||| ||||| |||||||| || Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGA 1849 >seq303 Length=42796 Score = 369 bits (408), Expect = 4e-97 Identities = 669/974 (69%), Gaps = 6/974 (1%) Strand=Plus/Minus Query 161557 TTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCTATTGGCGGTTGG 161616 ||||||||||| || ||| | | |||||||| || |||||| | || | || || || Sbjct 27668 TTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGAGGATGA 27609 Query 161617 CTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCTAGTTCCTATCTT 161676 || || || ||||||| || || |||||| | ||||| || || | |||||| Sbjct 27608 TTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGCTATCTA 27549 Query 161677 GAGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCT 161736 || ||| |||||| | || || || || ||| || ||| | ||||| || || Sbjct 27548 GAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGGCACTCG 27489 Query 161737 CTTCTTCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGG 161796 ||| | | | || ||||| || ||||| || ||| | ||| ||| |||| Sbjct 27488 CTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAAGTTGGA 27429 Query 161797 GGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTGGATTCATGCTTC-G 161855 || | || |||||| | || | || ||| | || | || ||||| || || | Sbjct 27428 GGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TGTTTAAG 27370 Query 161856 TCAGTTTGAACTTGCTCGTCTTATCGGTATCCGTCCTTACAATGCTATTGCTTTCTCTGG 161915 || |||||| |||| | | | | ||||| || ||||| ||||||||| | || Sbjct 27369 ACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTTCACCGG 27310 Query 161916 TCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGACAGTCGTCCTGGTT 161975 ||| ||||| |||||||| |||||| | || |||||| | || || || || || Sbjct 27309 TCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAGTTGATT 27250 Query 161976 CTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTTTTCCTACAAGGTTT 162035 || || ||| ||||| || || || ||||| || || ||||| ||| | ||||| || Sbjct 27249 TTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCAAGGGTT 27190 Query 162036 CCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGGTGGTGC 162095 || || || || || ||||| ||||| |||||||||||||||||||| || || ||||| Sbjct 27189 TCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGGAGGTGC 27130 Query 162096 TTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGGTGAACA 162155 || | ||||| || || || | |||||| |||| || | || ||||||||| Sbjct 27129 GTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGGTGTGTC 27070 Query 162156 AGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTAC 162215 | || || |||||| | | |||||| || |||||||| || ||||| || Sbjct 27069 GTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAATGGTAAC 27010 Query 162216 TGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCA 162275 || || ||||| || || ||||| || || | |||||| ||| ||||||||||| || Sbjct 27009 CGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTGGTTACA 26950 Query 162276 TTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGG 162335 |||||||||| | ||||| || || | || | || || | || | || || |||| Sbjct 26949 TTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGATGGTTGG 26890 Query 162336 ACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGA 162395 || || | ||| | | || ||||| ||||| ||||| ||| | || ||||| || || Sbjct 26889 TCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGCCGAAGA 26830 Query 162396 TCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATG 162455 ||||||||| ||||| || || ||||| ||||| | | |||||||| | ||||| || Sbjct 26829 TCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCGTGCTTG 26770 Query 162456 GTTGGC--ACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCT 162513 |||| ||| || ||||| ||||| || || | ||||| ||||||||| | ||| Sbjct 26769 AATGGCTATGCAG--GACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTTACCT 26712 Query 162514 AGAGGTAACGCACT 162527 | || || || || Sbjct 26711 CGCGGAAATGCTCT 26698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 550364983182000