Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chromera_20velia_20[genbank_20GCA_5F000585135.1_202014-03-03] 146,690 sequences; 187,454,854 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq13327 408 5e-109 seq303 381 7e-101 seq4610 87.8 2e-12 >seq13327 Length=3816 Score = 408 bits (452), Expect = 5e-109 Identities = 662/950 (70%), Gaps = 2/950 (0%) Strand=Plus/Minus Query 188880 CCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCCTACGCTTCTCGCTGCAACCAT 188939 |||||| ||| |||| ||||| || | | ||| | || ||| | | ||| || Sbjct 2796 CCGTCTATATATCGGATGGTTTGGATTATTAATGGTGCCAACGTTATTATTAGCAGT-AT 2738 Query 188940 C-TGCTTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAGACATTGATGGCATCCGCGAAC 188998 | || ||||| | || ||||| || ||||| || ||||| |||||||| || || || | Sbjct 2737 CGTGTTTCATTGCTGCTTTTGTAGCCGCACCGCCAGTAGATATTGATGGAATTCGTGAGC 2678 Query 188999 CCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTCTGGTGCTGTTGTCCCTTCAT 189058 | || | || || || | || ||||| || || ||||| || || || || || | Sbjct 2677 CAGTTTCAGGCTCTCTTCTATACGGAAATAATATTATCTCAGGAGCCGTAGTACCGAGTT 2618 Query 189059 CCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAGCCGCCTCACTCGATGAGTGGC 189118 | || || |||||| | || || || | | || || || | | || || || Sbjct 2617 CAAATGCTATTGGTATGCATTTGTATACGGTGTGAGATGCGATGTGTATTGAGGAATGAT 2558 Query 189119 TCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTTCCTCATCGGCATCTACGCCT 189178 | || ||||| || |||| |||| | || || | || ||| | ||||| | | | Sbjct 2557 TGTATAACGGAGGACCTTACCAATTCGTTGTACTACATTTCTTAATCGGGGTAGCATCAT 2498 Query 189179 ACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCTTGGATCTGCATTG 189238 | | ||||||||||| ||| | ||||||| | || ||||||||||| || | | | | Sbjct 2497 ATCTTGGTCGTGAGTGAGAATTAAGTTACCGTTTAGGAATGCGTCCTTGAATTTTCGTAG 2438 Query 189239 CTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAG 189298 ||| ||||||||| |||||||||||||| || || ||||| || || || | || |||| Sbjct 2437 CTTTCTCTGCACCAGTTGCAGCAGCATCGGCTGTATTTCTAGTTTACCCAATCGGACAAG 2378 Query 189299 GTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAACCTTCAACTACATGCTTGTCT 189358 | ||||| || || | |||||| | || || |||||| ||||||| |||||| || | Sbjct 2377 GATCTTTTTCAGATGGAATGCCTCTAGGAATTTCTGGAACATTCAACTTCATGCTAGTAT 2318 Query 189359 TCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTCGCAGGTGTCT 189418 |||| |||||||| || ||| | |||||||| ||||||||| ||||| ||||| || | Sbjct 2317 TCCAGGCAGAGCATAATATCTTAATGCACCCTTTCCACATGGCTGGAGTGGCAGGAGTAT 2258 Query 189419 TCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCGTTACCTCTTCACTGGTTCGTG 189478 | || || || | || || |||||||| || | ||||| || | | || | Sbjct 2257 TTGGAGGATCTTTATTTAGTGCTATGCATGGATCTTTAGTTACATCAACTTTAATTTCTA 2198 Query 189479 AAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGTTTGGACAAGAAGAAGAAACGT 189538 || | |||| || || | || ||||| || || || ||||| ||| | ||||| | Sbjct 2197 TGACTAGTGAAGATGAATCACCTAATTATGGGTATAAATTCGGACAGGAATATGAAACAT 2138 Query 189539 ACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTATCTTCCAATATGCATCGTTCA 189598 | || ||||| || || || ||||| ||||| ||||| ||||| |||| ||| || | Sbjct 2137 ATAATATCGTAGCCGCGCACGGATACTTCGGGCGTCTAATCTTTCAATTCGCAAGTTTTA 2078 Query 189599 ACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTA 189658 | ||||| ||||| | ||||||||||| || || || || || || ||||| || | Sbjct 2077 ATAACTCACGTTCTTTACACTTCTTCCTTGCAATTTGACCGGTAGTTGGAATCTGATTAA 2018 Query 189659 CCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATGGGTTCAACTTCAATCAATCCA 189718 | || | || | || || ||||| ||||| || ||||| ||||| ||||| ||||| | Sbjct 2017 CAGCAATGGGAATTAGTACTATGGCTTTCAATCTAAATGGATTCAATTTCAACCAATCAA 1958 Query 189719 TTCTTGATGGTCAAGGTCGTGTTCTGAACACATGGGCAGACGTTCTCAACCGTGCTGGTC 189778 | |||||| |||| ||||| | | || || || | | || ||||| || Sbjct 1957 TCATTGATGCAGAAGGACGTGTAATTTCGAGTTGAGCCGATATCTTAAATCGTGCAAATC 1898 Query 189779 TTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAACTTCCCTCTTGAT 189828 | || |||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct 1897 TAGGAATGGAAGTAATGCATGAGCGTAACGCGCACAATTTCCCTCTAGAT 1848 >seq303 Length=42796 Score = 381 bits (422), Expect = 7e-101 Identities = 673/978 (69%), Gaps = 2/978 (0%) Strand=Plus/Minus Query 190023 tttGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGT 190082 ||| | ||||| || || || |||||| | |||||||| || |||||| | || | || Sbjct 27674 TTTATATTTGTTGGCTGATCCGGATTATTGCTTTTTCCGACCGCTTATTTGGCGGTCGGA 27615 Query 190083 GGCTGGCTTACTGGCACGACGTTTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGT 190142 || || || || || || || | ||||| ||||| | || || || ||| ||| Sbjct 27614 GGATGATTTGTGGGTACTACTTTCGTAACAAGTTGGTATTCTCATGGTCTAGCATCTAGC 27555 Query 190143 TACCTTGAGGGTGCTAATTTTCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGT 190202 || || || ||| ||||||| | || || ||||| || ||||| ||| || ||||| Sbjct 27554 TATCTAGAAGGTTGTAATTTTTTAACTGCTGCTGTATCCACGCCGGCTAATTGCATGGGG 27495 Query 190203 CATTCTCTTCTTCTACTTTGGGGTCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAA 190262 || || ||| | ||| ||| ||||| ||| |||| || ||| | ||| ||| Sbjct 27494 CACTCGCTTTTATTACCTTGAGGTCCCGAAGCTCAGGGACTTTTAACTCGATGGTATCAA 27435 Query 190263 CTTGGGGGACTCTGGGCTTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATG 190322 |||| || | || |||| | || | || ||| | || | | ||||| || Sbjct 27434 GTTGGAGGTTTATGAAATTTTATCGCCTTTCATGGGACCTTAGGGTTGGCAGGATTT-TG 27376 Query 190323 CTTC-GTCAGTTTGAACTGGCACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTT 190381 || | || |||||| | ||| | | | | ||||| || ||||| ||||| || Sbjct 27375 TTTAAGACAATTTGAAATTGCAAGGTTAGTGCAGGTTCGTCCATATAATGCAATTGCTTT 27316 Query 190382 CTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAG 190441 | | ||||| || || |||||||| |||||| | || || ||| | |||||| |||| Sbjct 27315 CACCGGTCCAATTGCAGTTTTTGTATCTGTCTTTTTAATTTATCCTTTAGGTCAAGCGAG 27256 Query 190442 TTGGTTCTTCGCGCCATCCTTCGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCA 190501 ||| || || || ||| || || ||||| || || || | || | || ||||| || Sbjct 27255 TTGATTTTTTGCACCAAGTTTTGGAGTGGCTGCCATTTTTAGATTTTTACTATTCTTTCA 27196 Query 190502 GGGCTTCCATAACTGGACGCTGAACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGG 190561 || || |||||||| || ||||| || ||||| ||||||||||| |||||||| | || Sbjct 27195 AGGGTTTCATAACTGAACACTGAATCCTTTCCATATGATGGGTGTCGCAGGTATTTTAGG 27136 Query 190562 AGGAGCACTACTGTCAGCAATCCATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGG 190621 ||| || || |||| || |||||||| | ||||||| | ||||| || ||| ||||||| Sbjct 27135 AGGTGCGTTATTGTCTGCCATCCATGGAGCGACTGTACAAAATACCTTATATAAAGATGG 27076 Query 190622 TGAACAAGCAAACACGTTTAAAGCATTCGACTCTACACAAGAGGAAGAGACCTATTCGAT 190681 || |||| ||| || || | | || ||| |||||||| ||||| || Sbjct 27075 TGTGTCGTATGACACCTTTCGTGCTTTTAGCCCAACGCAATTAGAAGAGACTTATTCAAT 27016 Query 190682 GGTCACTGCCAACCGTTTCTGGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTG 190741 ||| || || || ||||| || ||||| || ||||| || || || ||| ||| | || Sbjct 27015 GGTAACCGCAAATCGTTTTTGATCTCAGATTTTTGGAGTAGCTTTTTCTAACAAGCGTTG 26956 Query 190742 GTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTAT 190801 ||| |||||||||||| | || || || || | || | || |||||| | | || || Sbjct 26955 GTTACATTTCTTTATGTTATTCGTACCGGTAACTGGCTTATGAACTTCTGCTTTTGGGAT 26896 Query 190802 TATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGC 190861 ||||||| || | || | | || || || ||||| || |||||| | ||||||| Sbjct 26895 GGTTGGTCTGGCCTTAAATTTAAGGGCATACGATTTTGTGTCTCAAGAGTTACGAGCAGC 26836 Query 190862 AGAAGATCCAGAGTTCGAGACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCG 190921 |||||||| || ||||| || ||||| || ||||||||| | | |||||||| | || Sbjct 26835 CGAAGATCCTGAATTCGAAACGTTTTATACCAAAAATATATTGCTTAATGAAGGAATCCG 26776 Query 190922 TTCATGGTTGGCACCTGTTGATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATT 190981 | | || |||| || ||||| ||||| ||||| | || ||||| ||||| || Sbjct 26775 TGCTTGAATGGCTATGCAGGACCAACCTCATGAAAATTTCATTTTCCCAGAGGAAGTTTT 26716 Query 190982 GCCAAGAGGCAACGCTCT 190999 || | || || ||||| Sbjct 26715 ACCTCGCGGAAATGCTCT 26698 >seq4610 Length=4342 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388 |||||||||||||| | | |||||| ||||| ||||| ||||| ||| |||||||||| Sbjct 2147 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCATCGGTTCGAC 2206 Query 19389 TCCGATATTCTCCATAA 19405 |||||||||||||| || Sbjct 2207 TCCGATATTCTCCACAA 2223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632917335060000