Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq62 215 9e-54 >seq62 Length=76287 Score = 215 bits (238), Expect = 9e-54 Identities = 199/247 (81%), Gaps = 5/247 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATG 131 ||||||||||| |||||||||||| | ||||||||| ||| | |||||| |||||| Sbjct 75586 TTTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCAACTGCCTTGAATACTCCAGCATG 75527 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||| ||||| | | ||| | || |||||| ||||||| |||||| || Sbjct 75526 GAATAATAAGTAAGGACTTTTG--TCTTTCTTATTGGTT-CTAGGACAAAAGTAATGGTT 75470 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| ||||| | ||||| || | |||||||||||||||| ||||| || Sbjct 75469 AATAGGGACAGTTGGGGGCATTCGTATTTAACAGCCAGAGGTGAAATTCTTAGATTTGTT 75410 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||||||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 75409 AAAGACGAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 75351 Query 312 TTAGGGG 318 ||||||| Sbjct 75350 TTAGGGG 75344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915197464896