Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835725.1_202016- 10-24] 277 sequences; 9,081,779 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq62 567 2e-159 >seq62 Length=76287 Score = 567 bits (628), Expect = 2e-159 Identities = 432/505 (86%), Gaps = 23/505 (5%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||||||| | | |||||||| ||||| |||||||||||||| Sbjct 75790 ACTCATTCCAATTACAAGACCGTTAGG--CCCTGTATTGTTATTTCTTGTCACTACCTCC 75847 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 75848 CTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 75907 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAG 181 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct 75908 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTC-ATAGCCACGGTAG 75966 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| || |||||| || |||| ||||||| |||||| |||||||| |||| || Sbjct 75967 GCCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCGCA---TC 76023 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 | | ||||||| ||| ||||||||||||||||||||| | |||||| Sbjct 76024 AGAG--ATGCGATCCGTAAAGTTATTATGAATCACCAAGCT-----------CATTGGTT 76070 Query 302 TTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||||| Sbjct 76071 CTTTATCTAATAAATACAACCCTTCCGCGAAGTTGGGTTTTTTCGCATGTATTAGCTCTA 76130 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||||||| | |||||| ||||| ||||||| ||||||| Sbjct 76131 GAATTACCACGGTTATCCATGTAGTTTTTGATTATCAAGTAAACTATAACTGTTTTAATG 76190 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 |||||||||||||||| | ||||| | |||||||||||||||||||||||||||||||| Sbjct 76191 AGCCATTCGCAGTTTCGCCGTATA-AAAGCTTATACTTAGACATGCATGGCTTAATCTTT 76249 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 76250 GAGACAAGCATATGACTACTGGCAG 76274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510395816192