Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1197 592 6e-167 >seq1197 Length=14044 Score = 592 bits (656), Expect = 6e-167 Identities = 463/547 (85%), Gaps = 12/547 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 10560 CTTTTAGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 10619 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 10620 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 10679 Query 127 GGCCCGCGAAGG---ACCTTAACGCCAGAAAATGGTCGG--TGAAGACCAGTTCCGCT-T 180 || | | ||||||| || | ||| | ||| | || || | | | Sbjct 10680 AGCG-GATATTTTCCACCTTAAAGCAA-AAACTCCTCGACATCTCGAGGAGGCTCAATAT 10737 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCG----AAACGG 236 | || |||||||| || |||| |||||||||||||| |||| ||| | Sbjct 10738 AACGGAATAAGTAAAGTGACATTAAGAGTAGTGGTATTTCAAGATCGCCCTTAAAAAGAG 10797 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| ||||||||| ||| || ||||||||||| ||||||||||||||||| Sbjct 10798 CTCCCACTTATGCTACACCTCCTAAGCCACTTCACAAAGTCAAACTAGAGTCAAGCTCAA 10857 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 10858 CAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 10917 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10918 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 10977 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10978 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGT 11037 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 11038 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 11097 Query 537 CTTTCTG 543 ||||||| Sbjct 11098 CTTTCTG 11104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635176485824