Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001835735.1_202016- 10-24] 1,438 sequences; 8,965,616 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1197 116 6e-24 >seq1197 Length=14044 Score = 116 bits (128), Expect = 6e-24 Identities = 98/118 (83%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | | || | ||||||||| ||||||| ||| || ||| Sbjct 10234 GTACGAGAGGAACAGTTGGGT-CACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 10177 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct 10176 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCATGC 10119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819188588032