Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq18 262 6e-68 >seq18 Length=6171 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 4586 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 4643 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| |||| ||| ||||||||||||||||||||||||||||| | ||| |||||| Sbjct 4644 CTCGTTAAAGATCAATAATTGCAATGATCTATCCCCATCACGATGCATACTCATAAGATT 4703 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||| ||| ||||| || || ||||||||||||||||||||| Sbjct 4704 ACCCATTTCCTTCGAAACAGGATATATACTCGCTGGATGCATCAGTGTAGCGCGCGTGCG 4763 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 4764 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 4812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999016525