Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq18 304 2e-80 >seq18 Length=6171 Score = 304 bits (336), Expect = 2e-80 Identities = 228/261 (87%), Gaps = 5/261 (2%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||| | | ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 4730 TACTCGCTGGATGCATCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAG 4789 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCT-GGAAGCCAATAGTCCCTCTAAGAAGCCA- 118 ||||||||||||||||||||||| | | || | ||| ||||||||||||||| | Sbjct 4790 ACCTGTTATTGCCTCAAACTTCCTCGCGTTAGGCACGCAA-AGTCCCTCTAAGAAGATAA 4848 Query 119 GCCACCAACCATAGT-CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177 | | || | | | | || |||||||||||||||||||||||||||||| ||||| Sbjct 4849 GATAGAAATAAAATTTCTATTAC-CTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAA 4907 Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4908 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 4967 Query 238 AGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||| Sbjct 4968 AGAAAGAGCTATCAATCTGTC 4988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798957935