Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 4e-18 >seq18 Length=6171 Score = 96.9 bits (106), Expect = 4e-18 Identities = 133/181 (73%), Gaps = 5/181 (3%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGC-TCGAATACATTACCATG 70 ||||||||||| |||||||||| | | ||||||||| ||| | |||||| | |||| Sbjct 5471 TTTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCAACTGCCTTGAATACTCCAGCATG 5412 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGAT 130 |||||||| ||||| | | ||| | || | |||| ||||||| |||||| | Sbjct 5411 GAATAATAAGTAAGGACTTTTG--TCTTTCTTATTGGTT-CTAGGACAAAA-GTAATGGT 5356 Query 131 AAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 |||| ||| ||| ||||| | ||||| || | || ||||||||||||| ||||| | Sbjct 5355 TAATAGGGACAGTTGGGGGCATTCGTATTTAACAGCCAGAGGTGAAATTCTTAGATTTGT 5296 Query 191 T 191 | Sbjct 5295 T 5295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999330400