Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20andersoni_20[genbank_20GCA_5F001865355.1_202016- 11-03] 135 sequences; 9,088,557 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq18 253 4e-65 >seq18 Length=6171 Score = 253 bits (280), Expect = 4e-65 Identities = 214/259 (83%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTAT-CG-GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| | || || || ||| ||||||||||||||||||||||||||| Sbjct 4844 CTTCTTAGAGGGACTTTGCGTGCCTAACGCGA-GGAAGTTTGAGGCAATAACAGGTCTGT 4786 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| ||||||||||||||||||||||||| | ||| ||||| || Sbjct 4785 GATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGATGCATCCAGCGAGTATATA 4726 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||| || | | ||||||||||| | | | ||||| |||||||||| |||| Sbjct 4725 TCCTGTTTCGAAGGAAATGGGTAATCTTATGAGTATGCATCGTGATGGGGATAGATCATT 4666 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 |||||||||| |||| |||||||||| |||||||||||| ||||||||| ||| |||| Sbjct 4665 GCAATTATTGATCTTTAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGCTGAT 4606 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 4605 TACGTCCCTGCCCTTTGTA 4587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947198721280