Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq133 259 7e-67 seq130 259 7e-67 seq104 259 7e-67 seq85 259 7e-67 >seq133 Length=430812 Score = 259 bits (286), Expect = 7e-67 Identities = 198/229 (86%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 426268 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 426211 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| ||||||||||||||||||||||||||||| | |||| |||||| Sbjct 426210 CTCGTTGAAGATCAATAATTGCAATGATCTATCCCCATCACGATGTATATTCATAAGATT 426151 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||| || | ||| | || |||||||||||||||||||| ||| Sbjct 426150 ACCCATTTCCTTCGAAACAGGAGA-ATACTTGATGGATACATCAGTGTAGCGCGCGCGCG 426092 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 426091 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 426043 >seq130 Length=374773 Score = 259 bits (286), Expect = 7e-67 Identities = 198/229 (86%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 2161 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 2104 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| ||||||||||||||||||||||||||||| | |||| |||||| Sbjct 2103 CTCGTTGAAGATCAATAATTGCAATGATCTATCCCCATCACGATGTATATTCATAAGATT 2044 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||| || | ||| | || |||||||||||||||||||| ||| Sbjct 2043 ACCCATTTCCTTCGAAACAGGAGA-ATACTTGATGGATACATCAGTGTAGCGCGCGCGCG 1985 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 1984 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 1936 >seq104 Length=7065 Score = 259 bits (286), Expect = 7e-67 Identities = 198/229 (86%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 4545 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 4602 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| ||||||||||||||||||||||||||||| | |||| |||||| Sbjct 4603 CTCGTTGAAGATCAATAATTGCAATGATCTATCCCCATCACGATGTATATTCATAAGATT 4662 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||| || | ||| | || |||||||||||||||||||| ||| Sbjct 4663 ACCCATTTCCTTCGAAACAGGAGA-ATACTTGATGGATACATCAGTGTAGCGCGCGCGCG 4721 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 4722 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 4770 >seq85 Length=187952 Score = 259 bits (286), Expect = 7e-67 Identities = 198/229 (86%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 4545 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 4602 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| ||||||||||||||||||||||||||||| | |||| |||||| Sbjct 4603 CTCGTTGAAGATCAATAATTGCAATGATCTATCCCCATCACGATGTATATTCATAAGATT 4662 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| ||| || | ||| | || |||||||||||||||||||| ||| Sbjct 4663 ACCCATTTCCTTCGAAACAGGAGA-ATACTTGATGGATACATCAGTGTAGCGCGCGCGCG 4721 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct 4722 GCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 4770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998943675