Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq133 134 8e-30 seq130 134 8e-30 seq104 134 8e-30 seq85 134 8e-30 >seq133 Length=430812 Score = 134 bits (148), Expect = 8e-30 Identities = 101/117 (86%), Gaps = 5/117 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 425740 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 425686 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 425685 AATCTCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 425629 >seq130 Length=374773 Score = 134 bits (148), Expect = 8e-30 Identities = 101/117 (86%), Gaps = 5/117 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 1633 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 1579 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1578 AATCTCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1522 >seq104 Length=7065 Score = 134 bits (148), Expect = 8e-30 Identities = 101/117 (86%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 5073 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 5127 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5128 AATCTCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5184 >seq85 Length=187952 Score = 134 bits (148), Expect = 8e-30 Identities = 101/117 (86%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 5073 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 5127 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 5128 AATCTCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 5184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399621550