Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq133 206 5e-51 seq130 206 5e-51 seq104 206 5e-51 seq85 206 5e-51 >seq133 Length=430812 Score = 206 bits (228), Expect = 5e-51 Identities = 196/246 (80%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct 425387 TTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCTATTGCCTTGAATACTCCAGCATGG 425446 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||||| | || | ||| | || |||||| |||||| ||||||||| Sbjct 425447 AATAATATTAAAGATTTTTA---TCTTTCTTATTGGTT-CTAGGATAAAAATAATGATTA 425502 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 425503 ATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTTA 425562 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 425563 AAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 425621 Query 313 TAGGGG 318 |||||| Sbjct 425622 TAGGGG 425627 >seq130 Length=374773 Score = 206 bits (228), Expect = 5e-51 Identities = 196/246 (80%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct 1280 TTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCTATTGCCTTGAATACTCCAGCATGG 1339 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||||| | || | ||| | || |||||| |||||| ||||||||| Sbjct 1340 AATAATATTAAAGATTTTTA---TCTTTCTTATTGGTT-CTAGGATAAAAATAATGATTA 1395 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 1396 ATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTTA 1455 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 1456 AAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 1514 Query 313 TAGGGG 318 |||||| Sbjct 1515 TAGGGG 1520 >seq104 Length=7065 Score = 206 bits (228), Expect = 5e-51 Identities = 196/246 (80%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct 5426 TTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCTATTGCCTTGAATACTCCAGCATGG 5367 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||||| | || | ||| | || |||||| |||||| ||||||||| Sbjct 5366 AATAATATTAAAGATTTTTA---TCTTTCTTATTGGTT-CTAGGATAAAAATAATGATTA 5311 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 5310 ATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTTA 5251 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 5250 AAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 5192 Query 313 TAGGGG 318 |||||| Sbjct 5191 TAGGGG 5186 >seq85 Length=187952 Score = 206 bits (228), Expect = 5e-51 Identities = 196/246 (80%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATGG 132 |||||||||| |||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct 5426 TTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCTATTGCCTTGAATACTCCAGCATGG 5367 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 ||||||| | || | ||| | || |||||| |||||| ||||||||| Sbjct 5366 AATAATATTAAAGATTTTTA---TCTTTCTTATTGGTT-CTAGGATAAAAATAATGATTA 5311 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 5310 ATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTTA 5251 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||| Sbjct 5250 AAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGT 5192 Query 313 TAGGGG 318 |||||| Sbjct 5191 TAGGGG 5186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198672960