Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq133 302 7e-80 seq130 302 7e-80 seq104 302 7e-80 seq85 302 7e-80 >seq133 Length=430812 Score = 302 bits (334), Expect = 7e-80 Identities = 224/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 426125 TACTTGATGGATACATCAGTGTAGCGCGCGCGCGGCCCAGGACATCTAAGGGCATCACAG 426066 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| |||||||| | | | || || | ||||||||||||||| ||| Sbjct 426065 ACCTGTTATTGCCTAAAACTTCC-TCGTGTTAAACACACAAAGTCCCTCTAAGAAGACAG 426007 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || | | | | |||||||||||||||||||||||||||||| ||||||| Sbjct 426006 ATAAGAAATAATTTTCTTATGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATT 425947 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 425946 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 425887 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 425886 AAAGAGCTATCAATCTGTC 425868 >seq130 Length=374773 Score = 302 bits (334), Expect = 7e-80 Identities = 224/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 2018 TACTTGATGGATACATCAGTGTAGCGCGCGCGCGGCCCAGGACATCTAAGGGCATCACAG 1959 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| |||||||| | | | || || | ||||||||||||||| ||| Sbjct 1958 ACCTGTTATTGCCTAAAACTTCC-TCGTGTTAAACACACAAAGTCCCTCTAAGAAGACAG 1900 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || | | | | |||||||||||||||||||||||||||||| ||||||| Sbjct 1899 ATAAGAAATAATTTTCTTATGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATT 1840 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1839 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 1780 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 1779 AAAGAGCTATCAATCTGTC 1761 >seq104 Length=7065 Score = 302 bits (334), Expect = 7e-80 Identities = 224/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 4688 TACTTGATGGATACATCAGTGTAGCGCGCGCGCGGCCCAGGACATCTAAGGGCATCACAG 4747 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| |||||||| | | | || || | ||||||||||||||| ||| Sbjct 4748 ACCTGTTATTGCCTAAAACTTCC-TCGTGTTAAACACACAAAGTCCCTCTAAGAAGACAG 4806 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || | | | | |||||||||||||||||||||||||||||| ||||||| Sbjct 4807 ATAAGAAATAATTTTCTTATGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATT 4866 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4867 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 4926 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 4927 AAAGAGCTATCAATCTGTC 4945 >seq85 Length=187952 Score = 302 bits (334), Expect = 7e-80 Identities = 224/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 4688 TACTTGATGGATACATCAGTGTAGCGCGCGCGCGGCCCAGGACATCTAAGGGCATCACAG 4747 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCA-ATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| |||||||| | | | || || | ||||||||||||||| ||| Sbjct 4748 ACCTGTTATTGCCTAAAACTTCC-TCGTGTTAAACACACAAAGTCCCTCTAAGAAGACAG 4806 Query 120 CCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | || | | | | |||||||||||||||||||||||||||||| ||||||| Sbjct 4807 ATAAGAAATAATTTTCTTATGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGAATT 4866 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4867 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 4926 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 4927 AAAGAGCTATCAATCTGTC 4945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798880745