Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq133 358 1e-96 seq104 358 1e-96 seq85 358 1e-96 seq130 352 5e-95 seq106 316 3e-84 seq84 316 3e-84 >seq133 Length=430812 Score = 358 bits (396), Expect = 1e-96 Identities = 237/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 430419 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 430360 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 430359 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 430300 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 430299 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 430240 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| || |||| | |||||||||||||||| Sbjct 430239 CTGTGGTAACTTTTCTGACACCTCTAGCTGTAATTTTCACAGATCTAAAGGATCGATAGG 430180 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 430179 CCATGCTTTCACAGTTTGTATTC 430157 >seq104 Length=7065 Score = 358 bits (396), Expect = 1e-96 Identities = 237/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 394 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 453 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 454 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 513 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 573 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| || |||| | |||||||||||||||| Sbjct 574 CTGTGGTAACTTTTCTGACACCTCTAGCTGTAATTTTCACAGATCTAAAGGATCGATAGG 633 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 634 CCATGCTTTCACAGTTTGTATTC 656 >seq85 Length=187952 Score = 358 bits (396), Expect = 1e-96 Identities = 237/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 394 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 453 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 454 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 513 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 514 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 573 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| || |||| | |||||||||||||||| Sbjct 574 CTGTGGTAACTTTTCTGACACCTCTAGCTGTAATTTTCACAGATCTAAAGGATCGATAGG 633 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 634 CCATGCTTTCACAGTTTGTATTC 656 >seq130 Length=374773 Score = 352 bits (390), Expect = 5e-95 Identities = 236/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 6312 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAGCCCAGCTCACGTTCCCTA 6253 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 6252 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 6193 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6192 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 6133 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| || |||| | |||||||||||||||| Sbjct 6132 CTGTGGTAACTTTTCTGACACCTCTAGCTGTAATTTTCACAGATCTAAAGGATCGATAGG 6073 Query 271 CCACACTTTCATGGTTTGTATTC 293 ||| |||||| |||||||||| Sbjct 6072 CCATGCTTTCACAGTTTGTATTC 6050 >seq106 Length=203018 Score = 316 bits (350), Expect = 3e-84 Identities = 195/208 (94%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 216 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 157 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 156 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 97 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 37 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||| |||||||||| Sbjct 36 CTGTGGTAACTTTTCTGACACCTCTAGC 9 >seq84 Length=248521 Score = 316 bits (350), Expect = 3e-84 Identities = 195/208 (94%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 216 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 157 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || ||| || |||||| || ||||||||||||||||| Sbjct 156 TTAGCGGGTGAACAATCCGACACTTTGGGACTTCTGCATCCCAATGATAGGAAGAGCCGA 97 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 96 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 37 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||||||| |||||||||| Sbjct 36 CTGTGGTAACTTTTCTGACACCTCTAGC 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398761120