Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq133 78.8 6e-13 seq130 78.8 6e-13 seq104 78.8 6e-13 seq85 78.8 6e-13 >seq133 Length=430812 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||| | ||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 426295 TCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAG 426238 Query 123 CT 124 || Sbjct 426237 CT 426236 >seq130 Length=374773 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Minus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||| | ||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 2188 TCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAG 2131 Query 123 CT 124 || Sbjct 2130 CT 2129 >seq104 Length=7065 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||| | ||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 4518 TCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAG 4575 Query 123 CT 124 || Sbjct 4576 CT 4577 >seq85 Length=187952 Score = 78.8 bits (86), Expect = 6e-13 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand=Plus/Plus Query 63 TCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAG 122 ||| ||||||| | ||||||||||| |||||||||||||||||||||||| || |||||| Sbjct 4518 TCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAGCGCAAG 4575 Query 123 CT 124 || Sbjct 4576 CT 4577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799591100