Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq133 587 2e-165 seq130 587 2e-165 seq104 587 2e-165 seq85 587 2e-165 >seq133 Length=430812 Score = 587 bits (650), Expect = 2e-165 Identities = 459/547 (84%), Gaps = 17/547 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 430123 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 430064 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 430063 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 430004 Query 127 GGCCCGCGAAGG-----ACCTTAACGCCAGAAAATGG-----TCGGTGAAGACCAGTTCC 176 | | ||||||| | | || || || ||||| ||| Sbjct 430003 AGTAAAATTAATTATTTACCTTAAATCTATAACATCAATTATTCATTGAAGT----TTCA 429948 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 | | || ||||||||| || ||| |||||||||||||| |||| || | Sbjct 429947 ATATAACGGAGTAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCAAA---G 429891 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct 429890 CTCCCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAA 429831 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 429830 CAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 429771 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 429770 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 429711 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 429710 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGT 429651 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 429650 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 429591 Query 537 CTTTCTG 543 |||||| Sbjct 429590 TTTTCTG 429584 >seq130 Length=374773 Score = 587 bits (650), Expect = 2e-165 Identities = 459/547 (84%), Gaps = 17/547 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 6016 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 5957 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 5956 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 5897 Query 127 GGCCCGCGAAGG-----ACCTTAACGCCAGAAAATGG-----TCGGTGAAGACCAGTTCC 176 | | ||||||| | | || || || ||||| ||| Sbjct 5896 AGTAAAATTAATTATTTACCTTAAATCTATAACATCAATTATTCATTGAAGT----TTCA 5841 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 | | || ||||||||| || ||| |||||||||||||| |||| || | Sbjct 5840 ATATAACGGAGTAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCAAA---G 5784 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct 5783 CTCCCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAA 5724 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 5723 CAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 5664 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5663 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 5604 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5603 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGT 5544 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 5543 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 5484 Query 537 CTTTCTG 543 |||||| Sbjct 5483 TTTTCTG 5477 >seq104 Length=7065 Score = 587 bits (650), Expect = 2e-165 Identities = 459/547 (84%), Gaps = 17/547 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 690 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 749 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 750 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 809 Query 127 GGCCCGCGAAGG-----ACCTTAACGCCAGAAAATGG-----TCGGTGAAGACCAGTTCC 176 | | ||||||| | | || || || ||||| ||| Sbjct 810 AGTAAAATTAATTATTTACCTTAAATCTATAACATCAATTATTCATTGAAGT----TTCA 865 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 | | || ||||||||| || ||| |||||||||||||| |||| || | Sbjct 866 ATATAACGGAGTAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCAAA---G 922 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct 923 CTCCCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAA 982 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 983 CAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 1042 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1043 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 1102 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1103 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGT 1162 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1163 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 1222 Query 537 CTTTCTG 543 |||||| Sbjct 1223 TTTTCTG 1229 >seq85 Length=187952 Score = 587 bits (650), Expect = 2e-165 Identities = 459/547 (84%), Gaps = 17/547 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 690 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 749 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 750 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 809 Query 127 GGCCCGCGAAGG-----ACCTTAACGCCAGAAAATGG-----TCGGTGAAGACCAGTTCC 176 | | ||||||| | | || || || ||||| ||| Sbjct 810 AGTAAAATTAATTATTTACCTTAAATCTATAACATCAATTATTCATTGAAGT----TTCA 865 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG 236 | | || ||||||||| || ||| |||||||||||||| |||| || | Sbjct 866 ATATAACGGAGTAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCAAA---G 922 Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct 923 CTCCCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAA 982 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 983 CAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 1042 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1043 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 1102 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1103 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGT 1162 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1163 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCA 1222 Query 537 CTTTCTG 543 |||||| Sbjct 1223 TTTTCTG 1229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197628960