Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq133 113 7e-23 seq130 113 7e-23 seq106 113 7e-23 seq104 113 7e-23 seq85 113 7e-23 seq84 113 7e-23 >seq133 Length=430812 Score = 113 bits (124), Expect = 7e-23 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| ||||||| ||| || ||| Sbjct 430449 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 430506 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 430507 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 430562 >seq130 Length=374773 Score = 113 bits (124), Expect = 7e-23 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| ||||||| ||| || ||| Sbjct 6342 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 6399 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 6400 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 6455 >seq106 Length=203018 Score = 113 bits (124), Expect = 7e-23 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| ||||||| ||| || ||| Sbjct 246 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 303 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 304 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 359 >seq104 Length=7065 Score = 113 bits (124), Expect = 7e-23 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| ||||||| ||| || ||| Sbjct 364 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 307 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 306 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 251 >seq85 Length=187952 Score = 113 bits (124), Expect = 7e-23 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| ||||||| ||| || ||| Sbjct 364 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 307 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 306 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 251 >seq84 Length=248521 Score = 113 bits (124), Expect = 7e-23 Identities = 96/116 (83%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| ||||||| ||| || ||| Sbjct 246 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATGCGGCTAGTTGAAAAGCTAGT 303 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 |||||||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 304 GCCGCGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819198849280