Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq133 556 4e-156 seq130 556 4e-156 seq104 556 4e-156 seq85 556 4e-156 >seq133 Length=430812 Score = 556 bits (616), Expect = 4e-156 Identities = 430/505 (85%), Gaps = 27/505 (5%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||||||| | | |||||||| ||||| |||||||||||||| Sbjct 425184 ACTCATTCCAATTACAAGACCGTTAGG--CCCTGTATTGTTATTTCTTGTCACTACCTCC 425127 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 425126 CTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 425067 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAG 181 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct 425066 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTC-ATAGCCACGGTAG 425008 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| || |||||| || |||| ||||||| |||||| |||||||| || | Sbjct 425007 GCCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCACAT---- 424952 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 || ||| ||| ||| |||||||||||| |||||||| | |||||| Sbjct 424951 AA----ATGTGATCCGTAAAGTTATTATGAGTCACCAAGA-----------GTATTGGTT 424907 Query 302 TTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||| Sbjct 424906 CTTTATCTAATAAATACAACCCTTCCGAGAAGTCGGGTCTTTTCGCATGTATTAGCTCTA 424847 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||||||||||| | |||||| ||||| ||||||| | ||||| Sbjct 424846 GAATTACCACGGTTATCCATGTAGTAAGG-ATTATCAAGTAAACTATAACTGTTATAATG 424788 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct 424787 AGCCATTCGCAGTTTAGCCGTATAGAA-GCTTATACTTAGACATGCATGGCTTAATCTTT 424729 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 424728 GAGACAAGCATATGACTACTGGCAG 424704 >seq130 Length=374773 Score = 556 bits (616), Expect = 4e-156 Identities = 430/505 (85%), Gaps = 27/505 (5%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||||||| | | |||||||| ||||| |||||||||||||| Sbjct 1077 ACTCATTCCAATTACAAGACCGTTAGG--CCCTGTATTGTTATTTCTTGTCACTACCTCC 1020 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1019 CTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 960 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAG 181 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct 959 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTC-ATAGCCACGGTAG 901 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| || |||||| || |||| ||||||| |||||| |||||||| || | Sbjct 900 GCCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCACAT---- 845 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 || ||| ||| ||| |||||||||||| |||||||| | |||||| Sbjct 844 AA----ATGTGATCCGTAAAGTTATTATGAGTCACCAAGA-----------GTATTGGTT 800 Query 302 TTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||| Sbjct 799 CTTTATCTAATAAATACAACCCTTCCGAGAAGTCGGGTCTTTTCGCATGTATTAGCTCTA 740 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||||||||||| | |||||| ||||| ||||||| | ||||| Sbjct 739 GAATTACCACGGTTATCCATGTAGTAAGG-ATTATCAAGTAAACTATAACTGTTATAATG 681 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct 680 AGCCATTCGCAGTTTAGCCGTATAGAA-GCTTATACTTAGACATGCATGGCTTAATCTTT 622 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 621 GAGACAAGCATATGACTACTGGCAG 597 >seq104 Length=7065 Score = 556 bits (616), Expect = 4e-156 Identities = 430/505 (85%), Gaps = 27/505 (5%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||||||| | | |||||||| ||||| |||||||||||||| Sbjct 5629 ACTCATTCCAATTACAAGACCGTTAGG--CCCTGTATTGTTATTTCTTGTCACTACCTCC 5686 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5687 CTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 5746 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAG 181 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct 5747 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTC-ATAGCCACGGTAG 5805 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| || |||||| || |||| ||||||| |||||| |||||||| || | Sbjct 5806 GCCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCACAT---- 5861 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 || ||| ||| ||| |||||||||||| |||||||| | |||||| Sbjct 5862 AA----ATGTGATCCGTAAAGTTATTATGAGTCACCAAGA-----------GTATTGGTT 5906 Query 302 TTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||| Sbjct 5907 CTTTATCTAATAAATACAACCCTTCCGAGAAGTCGGGTCTTTTCGCATGTATTAGCTCTA 5966 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||||||||||| | |||||| ||||| ||||||| | ||||| Sbjct 5967 GAATTACCACGGTTATCCATGTAGTAAGG-ATTATCAAGTAAACTATAACTGTTATAATG 6025 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct 6026 AGCCATTCGCAGTTTAGCCGTATAGAA-GCTTATACTTAGACATGCATGGCTTAATCTTT 6084 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 6085 GAGACAAGCATATGACTACTGGCAG 6109 >seq85 Length=187952 Score = 556 bits (616), Expect = 4e-156 Identities = 430/505 (85%), Gaps = 27/505 (5%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||||||| | | |||||||| ||||| |||||||||||||| Sbjct 5629 ACTCATTCCAATTACAAGACCGTTAGG--CCCTGTATTGTTATTTCTTGTCACTACCTCC 5686 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 5687 CTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 5746 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGGTAG 181 ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| Sbjct 5747 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTC-ATAGCCACGGTAG 5805 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 |||| || |||||| || |||| ||||||| |||||| |||||||| || | Sbjct 5806 GCCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCACAT---- 5861 Query 242 AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTT 301 || ||| ||| ||| |||||||||||| |||||||| | |||||| Sbjct 5862 AA----ATGTGATCCGTAAAGTTATTATGAGTCACCAAGA-----------GTATTGGTT 5906 Query 302 TTTTATCTAATAAATACACCCCTTCCGA--AGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||| ||||||||| ||||||| |||| |||||||||||||||| Sbjct 5907 CTTTATCTAATAAATACAACCCTTCCGAGAAGTCGGGTCTTTTCGCATGTATTAGCTCTA 5966 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||||||||||| | |||||| ||||| ||||||| | ||||| Sbjct 5967 GAATTACCACGGTTATCCATGTAGTAAGG-ATTATCAAGTAAACTATAACTGTTATAATG 6025 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| Sbjct 6026 AGCCATTCGCAGTTTAGCCGTATAGAA-GCTTATACTTAGACATGCATGGCTTAATCTTT 6084 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 6085 GAGACAAGCATATGACTACTGGCAG 6109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397809920