Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq129 100 2e-16 >seq129 Length=387383 Score = 100 bits (110), Expect = 2e-16 Identities = 335/513 (65%), Gaps = 10/513 (2%) Strand=Plus/Plus Query 65993 ACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTA 66052 |||||||||||||| ||| ||||| | |||||||||||| || || | | ||| Sbjct 182383 ACAAACTTGGGAAGTCCAATGGATGCCAAGTTGCAGACAGCAATTTCATTTGCGCTAGTA 182442 Query 66053 TACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTA 66112 ||||| | ||| || || || || ||||| | |||||||| ||||| | |||||| Sbjct 182443 TACTCTATAATCTCTGTACAGAGGTTACTAGAAACAATGGTGCCTAAATTTTTCTGATTA 182502 Query 66113 CTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGAC 66172 || || |||| || |||||||| || || ||||| || || || | ||| | Sbjct 182503 CTTTTTTGATTAGCGGCGTCCTTGTAGCAAATATAGGGAGTCCCCGTTTCTATTTGAGCT 182562 Query 66173 TCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCG 66231 | | || | |||||| ||||||||| || | | | || | |||| Sbjct 182563 TGGAGTATAAGGAACCAAAGCTTCTGTGCCTTCATTGT-CTTTCTTCCACGGCCTTGCTT 182621 Query 66232 TTCGTAATGTTCGTAGAGGTGTTCGAAGGAT--TCACCCCATACTTCGGACAGACATGGA 66289 ||| |||| ||| || | | ||| || || |||||||| || || || | | Sbjct 182622 TTCATAATCTTCATATA-ATTTTCTAA-AATCGTCACCCCAAACATCTTGAAGTCCACGG 182679 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 || | | || ||||| || | ||| || ||| | ||| || | |||||||| | Sbjct 182680 CATTCATCAGGGCACATAAGGGTCCAGTCTTGATCATTTTCAACTCTTTCCATAAATAAA 182739 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCG--TGCTCGTTGCTCCTCAATGCCGTGAT 66407 || || | ||| || || ||| ||||| || ||| || || || |||| |||| Sbjct 182740 TCGGGAACCCATAGAGCAGGGAAAAGATCACGGCATCTCATT--TCTTCCTTGCCATGAT 182797 Query 66408 TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGA 66467 |||| | | || | ||| |||| | || ||||||| || |||| ||| || || | Sbjct 182798 TTTTTCTGATTTCTATGAATTCAACAACATCAACATGCCAAGGCTCCAAGTATATTGCAA 182857 Query 66468 ACGAGCCCATACGTTTGCCGCCACCTTGGTCGA 66500 || ||| | | || || ||||||||||||| Sbjct 182858 TCGCTCCCTTTCTCTTTCCCCCACCTTGGTCGA 182890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567297422800