Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20baileyi_20[genbank_20GCA_5F001593455.1_202016-03- 17] 145 sequences; 8,493,640 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq136 84.2 8e-11 >seq136 Length=367210 Score = 84.2 bits (92), Expect = 8e-11 Identities = 207/316 (66%), Gaps = 15/316 (5%) Strand=Plus/Plus Query 341397 AGCCTTTCTTCTAGATACGAGTCCAGAAGAAAGAAATAGAGGCAAGACTGTAGAGACAGG 341456 ||| ||| | | ||||| | | ||||||||||| | ||| ||||| || || || Sbjct 99700 AGCTTTTATAATGGATACAAATGAAGAAGAAAGAAGCAAAGGTAAGACGGTGGAAGTTGG 99759 Query 341457 AAGAGAGACTTTTAGCTTTCAAGGGAATGAATATACCATTCTGGATGCTCCAGGTCACAG 341516 ||||| | |||||| || || | || ||| ||||| |||||||||||||||| Sbjct 99760 AAGAGCATCATTTAGCCTTGAAAACAGGAGATTTACGATTCTTGATGCTCCAGGTCACAA 99819 Query 341517 AAACTATGTTCCTAATGCTATCGAAGGTATCGCCTGTGCAGACATTGCTATCTTGGTAGT 341576 | || ||| || ||| || ||| | ||||| |||| | | ||| | | Sbjct 99820 GAGCTTTGTCCCGAATATGATTTCTGGTGCAAGCCAAGCAGATATTGGTGTTTTGATTAT 99879 Query 341577 TTCTGCCCGCAAAGGAGAGTTTGAAGCGGGCTTTGACAAAAAGGCAGAGGACGTGTCTGG 341636 ||| || | || || || |||||| | || ||||| ||||| ||| Sbjct 99880 TTCGGCTAGAAAGGGTGAATTTGAAACAGGATTTGA--------GAGAGG-------TGG 99924 Query 341637 TCAGACTAGAGAACATGCTACCCTAGCCAAAGCTCTGGGTGTACAGAGACTAATAGTTTT 341696 ||| |||||||||||||| | || || ||| |||| ||||| | || || ||| Sbjct 99925 TCAAACTAGAGAACATGCAATGCTTGCAAAAACTCTCGGTGTTAACCAGCTTATTGTTGC 99984 Query 341697 TATCAACAAGATGGAT 341712 || |||||||||||| Sbjct 99985 AATAAACAAGATGGAT 100000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884882898234485