Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305325.1_202015-10- 01] 18 sequences; 9,158,280 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 4e-18 >seq1 Length=1295931 Score = 96.9 bits (106), Expect = 4e-18 Identities = 129/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| |||||||||||||| || | |||| | | Sbjct 3663 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 3604 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 3603 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 3546 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 3545 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 3490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999910720