Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001305395.1_202015-10- 01] 18 sequences; 9,179,731 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5 583 3e-164 >seq5 Length=907609 Score = 583 bits (646), Expect = 3e-164 Identities = 457/545 (84%), Gaps = 11/545 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 208602 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 208543 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 208542 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 208483 Query 127 GGCCCGCG-----AAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTC 181 || || ||||||| | | || | | || | || | | Sbjct 208482 AGCAATAATAATTAATTACCTTAAATCAAAAACTCTTTAAATAAAAAAAAGAGGCTCAAT 208423 Query 182 ATT---GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT 238 || || ||||||||| || ||| |||||||||||||| ||||| | ||| Sbjct 208422 ATAACGGAATAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCGTA---GCT 208366 Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 ||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct 208365 CCCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAACA 208306 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 208305 GGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGAT 208246 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 208245 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 208186 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 208185 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTT 208126 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACT 538 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 208125 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATT 208066 Query 539 TTCTG 543 ||||| Sbjct 208065 TTCTG 208061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199705664