Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq45 233 4e-59 >seq45 Length=188157 Score = 233 bits (258), Expect = 4e-59 Identities = 210/260 (81%), Gaps = 4/260 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||| | | | || | | |||||||| |||||||||||||||||| Sbjct 187733 CTTCTTAGAGGGACTTTGTATGTTTAATAC-AGGGAAGTTTTAGGCAATAACAGGTCTGT 187791 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||| ||||||||| ||||||||||||||| | ||| | ||| || Sbjct 187792 GATGCCCTTAGATGTCCTGGGCCGCGCGCGCGCTACACTGATGCATCCATCAAGTATATA 187851 Query 190 ACCTTGGCCGGAAGGTC-TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 | || ||||| ||||||||||| | || | ||||| |||||||||| ||| Sbjct 187852 TTCCTGTTTCGAAGGAAATGGGTAATCTTTTGAATATGCATCGTGATGGGGATAGATCAT 187911 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||||||| |||| |||||||||| |||||||||||| ||||||||| ||| ||| Sbjct 187912 TGCAATTATTGATCTTGAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGCTGA 187971 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 187972 TTACGTCCCTGCCCTTTGTA 187991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199497984