Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483515.1_202015-12- 30] 53 sequences; 9,059,225 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 2e-17 >seq8 Length=3440 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| | ||||||||| | | ||| ||| || ||| Sbjct 3139 GTACGAGAGGAACAGTT-AGGTCACA-TAATTGGTTAATACAGCTAGTTGAAAAGCTAGT 3196 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || | ||||||||||| || ||||||||| |||||||||||||||||||||||||| Sbjct 3197 GCTGTGAAGCTACCATGTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 3252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199579392