Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq574 248 1e-63 >seq574 Length=1530 Score = 248 bits (274), Expect = 1e-63 Identities = 198/233 (85%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 166 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 223 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| |||| ||| ||||||||||||||||||||||||||||| | |||||| |||| Sbjct 224 CTCGTTCAAGATCAATAATTGCAATGATCTATCCCCATCACGATGCATATTCAAAAGATT 283 Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| ||| ||| ||| | || || ||||||||||||||||| || Sbjct 284 ACCCATTTCCTTCGAAACAGGAATATATACTTGATGGATGCATCAGTGTAGCGCGCGCGC 343 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 344 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCCCTG 396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751993399790