Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq574 203 6e-50 >seq574 Length=1530 Score = 203 bits (224), Expect = 6e-50 Identities = 196/247 (79%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATG 131 ||||||||||| |||||||||||| | ||||||||| | ||| | |||||| |||||| Sbjct 1053 TTTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCATATGCCTTGAATACTCCAGCATG 994 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||| | || | ||| |||| |||||| ||| || |||||||| Sbjct 993 GAATAATATTAAAGATTTTTA---TCTTTTTTATTGGTT-CTAAGATAAGAATAATGATT 938 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 937 AATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTT 878 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||| ||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 877 AAAGACAAACTAATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 819 Query 312 TTAGGGG 318 ||||||| Sbjct 818 TTAGGGG 812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191708288