Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq366 585 9e-165 >seq366 Length=4002 Score = 585 bits (648), Expect = 9e-165 Identities = 458/544 (84%), Gaps = 11/544 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 3530 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 3471 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 3470 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 3411 Query 127 GGCCCGCG-----AAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCA--GTTCCGCT 179 || || ||||||| | | ||| | | | || | | || Sbjct 3410 AGCAATAATAATTAATTACCTTAAATCAA-AAACTCTTTTATAAAAAAAGAGGCTCAATA 3352 Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239 | | || ||||||||| || ||| |||||||||||||| ||||| | |||| Sbjct 3351 TAACGGAATAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCGTA---GCTC 3295 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct 3294 CCACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAACAG 3235 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct 3234 GGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATA 3175 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3174 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACG 3115 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 3114 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTG 3055 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTT 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 3054 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTT 2995 Query 540 TCTG 543 |||| Sbjct 2994 TCTG 2991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635185185088