Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001483535.1_202015-12- 30] 906 sequences; 8,691,536 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq574 291 2e-76 seq609 269 8e-70 seq201 269 8e-70 >seq574 Length=1530 Score = 291 bits (322), Expect = 2e-76 Identities = 233/277 (84%), Gaps = 9/277 (3%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||| ||| ||||| ||||||| ||||| |||||||||||||| Sbjct 1263 ACTCATTCCAATTACAAAACCAAAAAGT--CCTGTATTGTTATTTCTTGTCACTACCTCC 1320 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | || | |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1321 CTGTATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 1380 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct 1381 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCATTGCCACGGTAGG 1440 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 ||| || |||||| || |||| ||||||| |||||| |||||||| || | | | | Sbjct 1441 CCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGA--TAT-GTCACATTA 1497 Query 243 AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAA 279 | || ||| ||| |||||||||||| ||||||| Sbjct 1498 A----TTGTGATCCGTAAAGTTATTATGAGTCACCAA 1530 >seq609 Length=1254 Score = 269 bits (298), Expect = 8e-70 Identities = 189/212 (89%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTA 353 |||||| ||||||||||||||||| ||||||| |||||| | ||||| |||||||||| Sbjct 1249 TTGGTTCTTTATCTAATAAATACAACCCTTCCATAAAGTCGAGTTTTTTCGCATGTATTA 1190 Query 354 GCTCTAGAATTACCACGGTTATCCATGTA-GTAAGGTACTATCAAATAAACGATAACTGA 412 ||||||||||||||||||||||||||||| |||| | |||||| ||||| ||||||| Sbjct 1189 GCTCTAGAATTACCACGGTTATCCATGTAAGTAAAAGATTATCAAGTAAACTATAACTGT 1130 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 | |||||||||||||||||||| || ||||| | | ||||||||||||||||||||||| Sbjct 1129 TATAATGAGCCATTCGCAGTTTAACCGTATAAAA-GTTTATACTTAGACATGCATGGCTT 1071 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| Sbjct 1070 AATCTTTGAGACAAGCATATGACTACTGGCAG 1039 >seq201 Length=10534 Score = 269 bits (298), Expect = 8e-70 Identities = 190/212 (90%), Gaps = 5/212 (2%) Strand=Plus/Minus Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTA 353 |||||| ||||||||||||||||| ||||||| |||||| | ||||| |||||||||| Sbjct 10529 TTGGTTCTTTATCTAATAAATACAACCCTTCCATAAAGTCGAGTTTTTTCGCATGTATTA 10470 Query 354 GCTCTAGAATTACCACGGTTATCCATGTA-GTAAGGTACTATCAAATAAACGATAACTGA 412 ||||||||||||||||||||||||||||| |||| | | |||||| ||||| ||||||| Sbjct 10469 GCTCTAGAATTACCACGGTTATCCATGTAAGTAAAG-ATTATCAAGTAAACTATAACTGT 10411 Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 | |||||||||||||||||||| || ||||| | | ||||||||||||||||||||||| Sbjct 10410 TATAATGAGCCATTCGCAGTTTAACCGTATA-AAAGTTTATACTTAGACATGCATGGCTT 10352 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||| Sbjct 10351 AATCTTTGAGACAAGCATATGACTACTGGCAG 10320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510386315776