Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593465.1_202016-03- 17] 119 sequences; 9,107,739 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq66 203 6e-50 >seq66 Length=1254 Score = 203 bits (224), Expect = 6e-50 Identities = 196/247 (79%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGC-TCGAATACATTAGCATG 131 ||||||||||| |||||||||||| | ||||||||| | ||| | |||||| |||||| Sbjct 242 TTTTACTTTGAGAAAATTAGAGTGCTTAAAGCAGGCATATGCCTTGAATACTCCAGCATG 301 Query 132 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATT 191 |||||||| | || | ||| |||| |||||| ||| || |||||||| Sbjct 302 GAATAATATTAAAGATTTTTA---TCTTTTTTATTGGTT-CTAAGATAAGAATAATGATT 357 Query 192 AATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 251 |||||||| ||| ||||| | ||||| || |||||||||||||||||| ||||| || Sbjct 358 AATAGGGACAGTTGGGGGCATTTGTATTTAACAGTCAGAGGTGAAATTCTTAGATTTGTT 417 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 ||||| ||||| ||||||||| || |||||||||||||||||||||| ||||||||| Sbjct 418 AAAGACAAACTAATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAG 476 Query 312 TTAGGGG 318 ||||||| Sbjct 477 TTAGGGG 483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198910912