Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593465.1_202016-03- 17] 119 sequences; 9,107,739 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq52 334 2e-89 seq67 268 3e-69 >seq52 Length=429 Score = 334 bits (370), Expect = 2e-89 Identities = 304/381 (80%), Gaps = 4/381 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 53 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 112 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 113 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 172 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 || || ||||||| | | ||| | | || | | || | | || Sbjct 173 AGCAATAAAATTACCTTAAATCAA-AAACTCTTTATAAAAAAGAGGCTCAATATAACGGA 231 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||| || ||| |||||||||||||| ||||| | ||||||||||| Sbjct 232 ATAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCGTA---GCTCCCACTTA 288 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 289 TGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 348 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 349 TTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATAGTAGATA 408 Query 367 GGGACAGTGGGAATCTCGTTA 387 ||||||||||||||||||||| Sbjct 409 GGGACAGTGGGAATCTCGTTA 429 >seq67 Length=4355 Score = 268 bits (296), Expect = 3e-69 Identities = 153/156 (98%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4355 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 4296 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 4295 AGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAATTTCTTCACTTTGACATTCAGAGCAC 4236 Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||| || |||||| Sbjct 4235 TGGGCAGAAATCACATTGCGTCAACACCATTTTCTG 4200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635198054112