Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593465.1_202016-03- 17] 119 sequences; 9,107,739 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq115 466 5e-129 seq57 192 2e-46 >seq115 Length=110672 Score = 466 bits (516), Expect = 5e-129 Identities = 368/437 (84%), Gaps = 23/437 (5%) Strand=Plus/Plus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTC 65 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 ||||||||||||||||||||||||||||||||||||| | ||| ||||||||| || | Sbjct 66 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCATTGCCACGGTAGGCCAATACC 125 Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATG 250 ||||| || |||| ||||||| |||||| |||||||| || | | || || Sbjct 126 CTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCACA---TTAAT----TG 178 Query 251 CGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTA 310 ||| ||| |||||||||||| ||||||| | |||||| |||||||| Sbjct 179 TGATCCGTAAAGTTATTATGAGTCACCAATTATA-----------TTGGTTCTTTATCTA 227 Query 311 ATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCA 368 ||||||||| ||||||| |||||| | ||||| ||||||||||||||||||||||||| Sbjct 228 ATAAATACAACCCTTCCATAAAGTCGAGTTTTTTCGCATGTATTAGCTCTAGAATTACCA 287 Query 369 CGGTTATCCATGT-AGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTC 427 ||||||||||||| ||||| | | |||||| ||||| ||||||| | ||||||||||||| Sbjct 288 CGGTTATCCATGTAAGTAAAG-ATTATCAAGTAAACTATAACTGTTATAATGAGCCATTC 346 Query 428 GCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||||||| || ||||| | | |||||||||||||||||||||||||||||||||||||| Sbjct 347 GCAGTTTAACCGTATA-AAAGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 405 Query 488 CATATGACTACTGGCAG 504 ||||||||||||||||| Sbjct 406 CATATGACTACTGGCAG 422 >seq57 Length=1115 Score = 192 bits (212), Expect = 2e-46 Identities = 133/148 (90%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 358 TAGAATTACCACGGTTATCCATGTA-GTAAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||||||||||||||||| |||| | |||||| ||||| ||||||| | || Sbjct 1115 TAGAATTACCACGGTTATCCATGTAAGTAAAAGATTATCAAGTAAACTATAACTGTTATA 1056 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||| || ||||| | | ||||||||||||||||||||||||||| Sbjct 1055 ATGAGCCATTCGCAGTTTAACCGTATAAAA-GTTTATACTTAGACATGCATGGCTTAATC 997 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 996 TTTGAGACAAGCATATGACTACTGGCAG 969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510398202624