Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001593475.1_202016-03- 17] 156 sequences; 9,156,091 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq133 466 5e-129 seq118 190 6e-46 >seq133 Length=670 Score = 466 bits (516), Expect = 5e-129 Identities = 367/437 (84%), Gaps = 22/437 (5%) Strand=Plus/Minus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 665 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTC 606 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 ||||||||||||||||||||||||||||||||||||| | ||| ||||||||| || | Sbjct 605 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCATTGCCACGGTAGGCCAATACC 546 Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATG 250 ||||| || |||| ||||||| |||||| |||||||| || | | || || Sbjct 545 CTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCACA---TTAAT----TG 493 Query 251 CGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTA 310 ||| ||| |||||||||||| ||||||| | |||||| |||||||| Sbjct 492 TGATCCGTAAAGTTATTATGAGTCACCAATTATA-----------TTGGTTCTTTATCTA 444 Query 311 ATAAATACACCCCTTCCG--AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCA 368 ||||||||| ||||||| |||||| | ||||| ||||||||||||||||||||||||| Sbjct 443 ATAAATACAACCCTTCCATAAAGTCGAGTTTTTTCGCATGTATTAGCTCTAGAATTACCA 384 Query 369 CGGTTATCCATGTA-GTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTC 427 |||||||||||||| |||| | |||||| ||||| ||||||| | ||||||||||||| Sbjct 383 CGGTTATCCATGTAAGTAAAAGATTATCAAGTAAACTATAACTGTTATAATGAGCCATTC 324 Query 428 GCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 ||||||| || ||||| | | |||||||||||||||||||||||||||||||||||||| Sbjct 323 GCAGTTTAACCGTATAAAA-GTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 265 Query 488 CATATGACTACTGGCAG 504 ||||||||||||||||| Sbjct 264 CATATGACTACTGGCAG 248 >seq118 Length=110374 Score = 190 bits (210), Expect = 6e-46 Identities = 132/146 (90%), Gaps = 3/146 (2%) Strand=Plus/Plus Query 360 GAATTACCACGGTTATCCATGTA-GTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||||||||||||||||| |||| | | |||||| ||||| ||||||| | |||| Sbjct 1 GAATTACCACGGTTATCCATGTAAGTAAAG-ATTATCAAGTAAACTATAACTGTTATAAT 59 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||| || ||||| | | ||||||||||||||||||||||||||||| Sbjct 60 GAGCCATTCGCAGTTTAACCGTATAAAA-GTTTATACTTAGACATGCATGGCTTAATCTT 118 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 119 TGAGACAAGCATATGACTACTGGCAG 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397643776