Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001945495.1_202017-01- 11] 13 sequences; 9,040,288 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq6 131 9e-29 seq5 131 9e-29 seq1 131 9e-29 >seq6 Length=877790 Score = 131 bits (144), Expect = 9e-29 Identities = 100/117 (85%), Gaps = 5/117 (4%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 2117 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 2171 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2172 AATCTCTAGTTGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 2228 >seq5 Length=1385909 Score = 131 bits (144), Expect = 9e-29 Identities = 100/117 (85%), Gaps = 5/117 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 1036289 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 1036235 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1036234 AATCTCTAGTTGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1036178 >seq1 Length=477241 Score = 131 bits (144), Expect = 9e-29 Identities = 100/117 (85%), Gaps = 5/117 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| |||||||| || |||| || || ||| | || Sbjct 476539 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGAAGGAGT---AAGGA--ACAACCTCC 476485 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 476484 AATCTCTAGTTGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 476428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399966070