Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F001945495.1_202017-01- 11] 13 sequences; 9,040,288 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq6 75.2 1e-11 seq5 75.2 1e-11 seq1 75.2 1e-11 >seq6 Length=877790 Score = 75.2 bits (82), Expect = 1e-11 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 42 TATTATTCCATGCTAATGTATTCG-GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 |||||||||||||| |||||| ||| || ||||||||| | |||||||||||||||| Sbjct 2404 TATTATTCCATGCTGGAGTATTCAAGGCATATGCCTGCTTTAAGCACTCTAATTTTCTCA 2463 Query 101 AGGTAAAA 108 | |||||| Sbjct 2464 AAGTAAAA 2471 >seq5 Length=1385909 Score = 75.2 bits (82), Expect = 1e-11 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 42 TATTATTCCATGCTAATGTATTCG-GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 |||||||||||||| |||||| ||| || ||||||||| | |||||||||||||||| Sbjct 1036002 TATTATTCCATGCTGGAGTATTCAAGGCATATGCCTGCTTTAAGCACTCTAATTTTCTCA 1035943 Query 101 AGGTAAAA 108 | |||||| Sbjct 1035942 AAGTAAAA 1035935 >seq1 Length=477241 Score = 75.2 bits (82), Expect = 1e-11 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 42 TATTATTCCATGCTAATGTATTCG-GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCA 100 |||||||||||||| |||||| ||| || ||||||||| | |||||||||||||||| Sbjct 476252 TATTATTCCATGCTGGAGTATTCAAGGCATATGCCTGCTTTAAGCACTCTAATTTTCTCA 476193 Query 101 AGGTAAAA 108 | |||||| Sbjct 476192 AAGTAAAA 476185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199925042