Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20hominis_20[genbank_20GCA_5F002223825.1_202015-12- 11] 12 sequences; 9,068,851 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2 244 2e-62 >seq2 Length=988320 Score = 244 bits (270), Expect = 2e-62 Identities = 197/233 (85%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 306044 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 305987 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||| |||| ||| ||||||||||||||||||||||||||||| | |||||| |||| Sbjct 305986 CTCGTGCAAGATCAATAATTGCAATGATCTATCCCCATCACGATGCATATTCAAAAGATT 305927 Query 120 ACCCGGACCTGTCGGCCAAGGTG-ATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| ||| ||| ||| | || || ||||||||||||||||| || Sbjct 305926 ACCCATTTCCTTCGAAACAGGAATATATACTTGATGGATGCATCAGTGTAGCGCGCGCGC 305867 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 305866 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCCCTG 305814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999912580