Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq54 244 2e-62 >seq54 Length=196647 Score = 244 bits (270), Expect = 2e-62 Identities = 198/233 (85%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||| |||| ||||||| |||||||||||||||| | Sbjct 195508 GTACAAAGGGCAGGGACGTAATCAGCGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 195451 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| |||| ||| ||||||||||||||||||||||||||||| | |||||| |||| Sbjct 195450 CTCGTTCAAGATCAATAATTGCAATGATCTATCCCCATCACGATGCATATTCAAAAGATT 195391 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| ||| | || ||| | || || ||||||||||||||||| || Sbjct 195390 ACCCATTTCCTTCGAAACAGGATTATT-ACTTGATGGATGCATCAGTGTAGCGCGCGCGC 195332 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||| ||||||||||||||||||||||||||||||||| |||||||| || Sbjct 195331 GGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCCCTG 195279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751999584755