Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq54 293 4e-77 >seq54 Length=196647 Score = 293 bits (324), Expect = 4e-77 Identities = 224/262 (85%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 195364 TACTTGATGGATGCATCAGTGTAGCGCGCGCGCGGCCCAGGACATCTAAGGGCATCACAG 195305 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGA-AGCCAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| |||||||| | | | | ||| ||||||||||||||| || Sbjct 195304 ACCTGTTATTGCCTAAAACTTCCCTGTATTAAACATACAA-AGTCCCTCTAAGAAGACAA 195246 Query 120 CCACCAACCATAGTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | || ||| | | | |||||||||||||||||||||||||||||| |||| Sbjct 195245 ATAAAAAATATAATATTTCTTATGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 195186 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 195185 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 195126 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 195125 AAGAAAGAGCTATCAATCTGTC 195104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799560017