Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20meleagridis_20[genbank_20GCA_5F001593445.1_202016- 03-17] 57 sequences; 8,973,200 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq50 589 7e-166 >seq50 Length=347251 Score = 589 bits (652), Expect = 7e-166 Identities = 458/542 (85%), Gaps = 9/542 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||| Sbjct 2753 CTTTTGGTCTACATGAGATTTCTGTTCTCATTGAGCTTACCTTAGGACACCTGCGTTACC 2694 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||| ||||| ||||| || | |||| Sbjct 2693 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCATCTGACTATGTCTTCCGCGAAGATC 2634 Query 127 GGCCCGCG----AAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCT-TC 181 || || ||||||| | | ||| | | || | || | | | Sbjct 2633 AGCAATAATAATAATTACCTTAAATCAA-AAACTCTTTTAAAAAAAAGAGGCTCAATATA 2575 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241 | || ||||||||| || ||| |||||||||||||| |||| || |||||| Sbjct 2574 ACGGAATAAGTAAAATGACATTAAAAGTAGTGGTATTTCAAGATCGCCAAA---GCTCCC 2518 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct 2517 ACTTATGCTACACCTTCTAAGCCATTTCACAAAGTCAAACTAGAGTCAAGCTCAACAGGG 2458 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 2457 TCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGCTAGATAGT 2398 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2397 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 2338 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2337 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGTTTGAA 2278 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 2277 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTTTC 2218 Query 542 TG 543 || Sbjct 2217 TG 2216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199067936