Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F001305455.2_202016-05- 09] 18 sequences; 9,104,817 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq14 527 2e-147 seq12 134 4e-29 >seq14 Length=885235 Score = 527 bits (584), Expect = 2e-147 Identities = 422/505 (84%), Gaps = 25/505 (5%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||||| ||| ||||| ||||||| ||||| |||||||||||||| Sbjct 194724 ACTCATTCCAATTACAAAACCAAAAAGT--CCTGTATTGTTATTTCTTGTCACTACCTCC 194667 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | || | |||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 194666 CTGTATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTC 194607 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct 194606 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTCATTGCCACGGTAGG 194547 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 ||| || |||||| || |||| ||||||| |||||| |||||||| || | Sbjct 194546 CCAATACCCTACCGTCTAAAGCTGATAGGTCAGAAACTTGAATGATATGTCAC------- 194494 Query 243 AGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTT 302 | ||| ||| ||| |||||||||||| ||||||| | |||||| Sbjct 194493 ATTTAATGTGATCCGTAAAGTTATTATGAGTCACCAATTA-----------TATTGGTTC 194445 Query 303 TTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 ||||||||||||||||| ||||||| |||||| | ||||| ||||||||||||||||| Sbjct 194444 TTTATCTAATAAATACAACCCTTCCATAAAGTCGAGTTTTTTCGCATGTATTAGCTCTAG 194385 Query 361 AATTACCACGGTTATCCATGT-AGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 ||||||||||||||||||||| ||||| | | |||||| ||||| ||||||| | ||||| Sbjct 194384 AATTACCACGGTTATCCATGTAAGTAAAG-ATTATCAAGTAAACTATAACTGTTATAATG 194326 Query 420 AGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||| || ||||| | | |||||||||||||||||||||||||||||| Sbjct 194325 AGCCATTCGCAGTTTAACCGTATA-AAAGTTTATACTTAGACATGCATGGCTTAATCTTT 194267 Query 480 GAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| Sbjct 194266 GAGACAAGCATATGACTACTGGCAG 194242 >seq12 Length=1161722 Score = 134 bits (148), Expect = 4e-29 Identities = 88/96 (92%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATG 468 ||| | |||||||||||||||||||| || ||||| | | ||||||||||||||||||| Sbjct 1154492 CTGTTATAATGAGCCATTCGCAGTTTAACCGTATAAAA-GTTTATACTTAGACATGCATG 1154434 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| Sbjct 1154433 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1154398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399728128