Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptosporidium_20parvum_20[genbank_20GCA_5F002093595.1_202017-04- 14] 1,076 sequences; 9,111,587 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq780 297 3e-78 >seq780 Length=3729 Score = 297 bits (328), Expect = 3e-78 Identities = 225/262 (86%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||| | ||| | | ||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 369 TACTTGATGGATGCATCAGTGTAGCGCGCGCGCGGCCCAGGACATCTAAGGGCATCACAG 310 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGA-AGCCAATAGTCCCTCTAAGAAGCCAG 119 |||||||||||||| |||||||| | | | | ||| ||||||||||||||| ||| Sbjct 309 ACCTGTTATTGCCTAAAACTTCCCTGTATTAAACATACAA-AGTCCCTCTAAGAAGACAG 251 Query 120 CCACCAACCATAGTCGATGG---GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 | || ||| | | | |||||||||||||||||||||||||||||| |||| Sbjct 250 ATAAAAAATATAATATTTCTTATGTCTATTTAGCAGGTTAAGGTCTCGTTCGTTAACGGA 191 Query 177 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 ATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATC 131 Query 237 AAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||| Sbjct 130 AAGAAAGAGCTATCAATCTGTC 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796791694356